(Q40174135)

18 September 2017

Pathway discovery in metabolic networks by subgraph extraction (English)

1 reference

18 September 2017

1 reference

4

1 reference

18 September 2017

Karoline Faust

1

1 reference

18 September 2017

Pierre Dupont

series ordinal

2

1 reference

18 September 2017

Jérôme Callut

series ordinal

3

1 reference

18 September 2017

language of work or name

English

0 references

publication date

12 March 2010

1 reference

18 September 2017

1 reference

18 September 2017

26

1 reference

18 September 2017

9

1 reference

18 September 2017

1211-1218

1 reference

KEGG spider: interpretation of genomics data in the context of the global gene metabolic network

18 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2859126

Elementary mode analysis: a useful metabolic pathway analysis tool for characterizing cellular metabolism

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2859126

EcoCyc: a comprehensive view of Escherichia coli biology

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2859126

NeAT: a toolbox for the analysis of biological networks, clusters, classes and pathways

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2859126

Automated extraction of meaningful pathways from quantitative proteomics data.

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2859126

The MetaCyc Database of metabolic pathways and enzymes and the BioCyc collection of Pathway/Genome Databases

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2859126

Flux balance analysis in the era of metabolomics

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2859126

Metabolic PathFinding: inferring relevant pathways in biochemical networks

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2859126

MetaCyc: a multiorganism database of metabolic pathways and enzymes.

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2859126

Discovering regulatory and signalling circuits in molecular interaction networks

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2859126

Graph-based analysis of metabolic networks.

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2859126

Representing and analysing molecular and cellular function using the computer

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2859126

Metabolic flux balance analysis and the in silico analysis of Escherichia coli K-12 gene deletions

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2859126

Detection of elementary flux modes in biochemical networks: a promising tool for pathway analysis and metabolic engineering.

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2859126

Identifying functional modules in protein-protein interaction networks: an integrated exact approach

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2859126

Inferring meaningful pathways in weighted metabolic networks

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2859126

MetaRoute: fast search for relevant metabolic routes for interactive network navigation and visualization

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2859126

Identifying regulatory subnetworks for a set of genes

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2859126

Metabolic pathway analysis web service (Pathway Hunter Tool at CUBIC).

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2859126

Inferring pathways from gene lists using a literature-derived network of biological relationships.

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2859126

A note on two problems in connexion with graphs

20 August 2018

1 reference

Crossref

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTQ105

Metabolic Pathfinding Using RPAIR Annotation

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTQ105

TICL - a web tool for network-based interpretation of compound lists inferred by high-throughput metabolomics

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20228128

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1093/BIOINFORMATICS/BTQ105

1 reference

journals/bioinformatics/FaustDCH10

18 September 2017

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

18 September 2017

PubMed publication ID

20228128

1 reference