(Q40201982)

18 September 2017

New stochastic strategy to analyze helix folding (English)

1 reference

18 September 2017

Moret MA

1

1 reference

18 September 2017

Bisch PM

series ordinal

2

1 reference

18 September 2017

Mundim KC

series ordinal

3

1 reference

18 September 2017

Pascutti PG

series ordinal

4

1 reference

18 September 2017

language of work or name

English

0 references

publication date

1 March 2002

1 reference

18 September 2017

10

1 reference

based on heuristic

inferred from page(s)

published in

Biophysical Journal

1 reference

18 September 2017

82

1 reference

18 September 2017

3

1 reference

18 September 2017

1123-1132

1 reference

Optimization by Simulated Annealing

18 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301918

The structure of proteins; two hydrogen-bonded helical configurations of the polypeptide chain

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301918

Stereochemistry of polypeptide chain configurations

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301918

Position dependence of amino acid intrinsic helical propensities II: non-charged polar residues: Ser, Thr, Asn, and Gln

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301918

The alpha-helix folds on the millisecond time scale

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301918

Helix folding simulations with various initial conformations

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301918

Navigating the folding routes

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301918

Funnels, pathways, and the energy landscape of protein folding: a synthesis

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301918

Folding simulations of alanine-based peptides with lysine residues

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301918

22 September 2017

How does a protein fold?

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301918

Refined three-dimensional solution structure of insect defensin A

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301918

Thermodynamic parameters for the helix-coil transition of oligopeptides: molecular dynamics simulation with the peptide growth method

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301918

Nature of the charged-group effect on the stability of the C-peptide helix

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301918

Insect immunity: isolation from immune blood of the dipteran Phormia terranovae of two insect antibacterial peptides with sequence homology to rabbit lung macrophage bactericidal peptides

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301918

Unusually stable helix formation in short alanine-based peptides

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301918

Dominant forces in protein folding

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301918

The folding of hen lysozyme involves partially structured intermediates and multiple pathways

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301918

Structural energetics of the molten globule state

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301918

Pathways for protein folding: is a new view needed?

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301918

Protein folding: concepts and perspectives

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301918

Elucidating the folding problem of helical peptides using empirical parameters. II. Helix macrodipole effects and rational modification of the helical content of natural peptides.

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301918

Thermodynamics and mechanism of alpha helix initiation in alanine and valine peptides.

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301918

Prediction of protein backbone conformation based on seven structure assignments. Influence of local interactions

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301918

A molecular dynamics simulation of polyalanine: an analysis of equilibrium motions and helix-coil transitions

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301918

Structure of a rapidly formed intermediate in ribonuclease T1 folding

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301918

Kinetic steps for alpha-helix formation

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301918

Role of water on unfolding kinetics of helical peptides studied by molecular dynamics simulations

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301918

Folding and stability of a tryptophan-containing mutant of ubiquitin.

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301918

Folding the main chain of small proteins with the genetic algorithm.

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301918

Molecular dynamics simulation of alpha-melanocyte stimulating hormone in a water-membrane model interface

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301918

Early steps in cytochrome c folding probed by time-resolved circular dichroism and fluorescence spectroscopy

4 November 2018

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2802%2975471-4

A helix stop signal in the isolated S-peptide of ribonuclease A

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2802%2975471-4

Equation of State Calculations by Fast Computing Machines

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2802%2975471-4

Multifractality, Levinthal paradox, and energy hypersurface

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2802%2975471-4

Traveling salesman problem and Tsallis statistics

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2802%2975471-4

The protein folding problem

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2802%2975471-4

Proteins with selected sequences fold into unique native conformation

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2802%2975471-4

Tests of the helix dipole model for stabilization of α-helices

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2802%2975471-4

Possible generalization of Boltzmann-Gibbs statistics

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2802%2975471-4

Fundamental dimensions of polypeptide chains

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2802%2975471-4

inferred from DOI database lookup

7 January 2021

based on heuristic

Identifiers

DOI

10.1016/S0006-3495(02)75471-4

1 reference

release_sjnjgj5j7nevpbh3yev4aexr4a

18 September 2017

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/sjnjgj5j7nevpbh3yev4aexr4a

mapped directly with Wikidata item

24 November 2022

based on heuristic

1 reference

18 September 2017

PubMed publication ID

11867432

1 reference