(Q40226078)

18 September 2017

Structural preference for changes in the direction of the Ca2+-induced transition: a study of the regulatory domain of skeletal troponin-C. (English)

1 reference

18 September 2017

Felicia Pitici

1

1 reference

PMC publication ID

1302595

18 September 2017

language of work or name

English

0 references

publication date

1 January 2003

1 reference

18 September 2017

1 reference

18 September 2017

84

1 reference

18 September 2017

1

1 reference

18 September 2017

82-101

1 reference

All-atom empirical potential for molecular modeling and dynamics studies of proteins

18 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1302595

Structure and interaction site of the regulatory domain of troponin-C when complexed with the 96-148 region of troponin-I

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1302595

Structure and dynamics of calmodulin in solution.

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1302595

An interaction-based analysis of calcium-induced conformational changes in Ca2+ sensor proteins

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1302595

Structures of four Ca2+-bound troponin C at 2.0 A resolution: further insights into the Ca2+-switch in the calmodulin superfamily

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1302595

Structural details of a calcium-induced molecular switch: X-ray crystallographic analysis of the calcium-saturated N-terminal domain of troponin C at 1.75 A resolution

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1302595

Mechanism of direct coupling between binding and induced structural change in regulatory calcium binding proteins

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1302595

NMR solution structure of calcium-saturated skeletal muscle troponin C

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1302595

Diverse essential functions revealed by complementing yeast calmodulin mutants

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1302595

Modulation of calmodulin plasticity in molecular recognition on the basis of x-ray structures

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1302595

Essential dynamics of proteins

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1302595

A sampling problem in molecular dynamics simulations of macromolecules

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1302595

Molecular dynamics simulations of the glucocorticoid receptor DNA-binding domain in complex with DNA and free in solution

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1302595

Structures of the troponin C regulatory domains in the apo and calcium-saturated states

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1302595

Electronic distributions within protein phenylalanine aromatic rings are reflected by the three-dimensional oxygen atom environments

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1302595

Thin filament proteins and thin filament-linked regulation of vertebrate muscle contraction

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1302595

Structure And Evolution Of Calcium-Modulated Protein

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1302595

Normal modes for specific motions of macromolecules: application to the hinge-bending mode of lysozyme

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1302595

Refined crystal structure of troponin C from turkey skeletal muscle at 2.0 A resolution

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1302595

A 500 ps molecular dynamics simulation study of interleukin-1 beta in water. Correlation with nuclear magnetic resonance spectroscopy and crystallography.

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1302595

Backbone and methyl dynamics of the regulatory domain of troponin C: anisotropic rotational diffusion and contribution of conformational entropy to calcium affinity.

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1302595

Intermolecular tuning of calmodulin by target peptides and proteins: differential effects on Ca2+ binding and implications for kinase activation

15 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1302595

Solvation energies of amino acid side chains and backbone in a family of host-guest pentapeptides.

15 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1302595

Structural analysis of carboxypeptidase A and its complexes with inhibitors as a basis for modeling enzyme recognition and specificity.

15 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1302595

On the role of methionine residues in the sequence-independent recognition of nonpolar protein surfaces

15 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1302595

Effects of high pressure and temperature on the wild-type and F29W mutant forms of the N-domain of avian troponin C.

15 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1302595

Essential dynamics of the cellular retinol-binding protein--evidence for ligand-induced conformational changes.

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1302595

The effect of Met-->Leu mutations on calmodulin's ability to activate cyclic nucleotide phosphodiesterase.

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1302595

Vibrational Dynamics of Folded Proteins: Significance of Slow and Fast Motions in Relation to Function and Stability

20 August 2018

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2803%2974834-6

CHARMM: A program for macromolecular energy, minimization, and dynamics calculations

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2803%2974834-6

The Protein Switch of Muscle Contraction

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2803%2974834-6

Backbone dynamics and energetics of a calmodulin domain mutant exchanging between closed and open conformations

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2803%2974834-6

Inhibition of mutant troponin C activity by an intra-domain disulphide bond

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2803%2974834-6

Model-free methods of analyzing domain motions in proteins from simulation: a comparison of normal mode analysis and molecular dynamics simulation of lysozyme

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2803%2974834-6

Comparison of simple potential functions for simulating liquid water

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2803%2974834-6

A solution for the best rotation to relate two sets of vectors

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2803%2974834-6

Calcium binding to the regulatory N-domain of skeletal muscle troponin C occurs in a stepwise manner

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2803%2974834-6

NMR studies of Ca2+ binding to the regulatory domains of cardiac and E41A skeletal muscle troponin C reveal the importance of site I to energetics of the induced structural changes

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2803%2974834-6

Interaction of the second binding region of troponin I with the regulatory domain of skeletal muscle troponin C as determined by NMR spectroscopy

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2803%2974834-6

The role of Phe-92 in the Ca(2+)-induced conformational transition in the C-terminal domain of calmodulin

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2803%2974834-6

A calmodulin-target peptide hybrid molecule with unique calcium-binding properties

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2803%2974834-6

Numerical integration of the cartesian equations of motion of a system with constraints: molecular dynamics of n-alkanes

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2803%2974834-6

Normal mode analysis of G-actin

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2803%2974834-6

The essential dynamics of thermolysin: Confirmation of the hinge-bending motion and comparison of simulations in vacuum and water

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2803%2974834-6

Protein engineering and NMR studies of calmodulin

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2803%2974834-6

Proteolytic fragments of troponin C. Interactions with the other troponin subunits and biological activity

7 January 2021

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/12524267

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

A structural role for the Ca2+-Mg2+ sites on troponin C in the regulation of muscle contraction. Preparation and properties of troponin C depleted myofibrils

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/12524267

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1016/S0006-3495(03)74834-6

1 reference

18 September 2017

1 reference

PMC publication ID

1302595

18 September 2017

PubMed publication ID

12524267

1 reference

PMC publication ID

1302595