(Q40252044)

18 September 2017

A unified mixed effects model for gene set analysis of time course microarray experiments (English)

1 reference

18 September 2017

Lily Wang

1

1 reference

18 September 2017

Xi Chen

2

1 reference

18 September 2017

Russell D Wolfinger

3

1 reference

18 September 2017

Jeffrey L Franklin

4

1 reference

18 September 2017

Robert J Coffey

5

1 reference

18 September 2017

Bing Zhang

6

1 reference

18 September 2017

7 November 2009

1 reference

Statistical Applications in Genetics and Molecular Biology

18 September 2017

1 reference

18 September 2017

8

1 reference

18 September 2017

Article 47

1 reference

maintained by WikiProject

18 September 2017

WikiProject Mathematics

0 references

cites work

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Supervised principal component analysis for gene set enrichment of microarray data with continuous or survival outcomes

22 September 2017

1 reference

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Domain-enhanced analysis of microarray data using GO annotations

22 September 2017

1 reference

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Applying the generalized partitioning principle to control the generalized familywise error rate

22 September 2017

1 reference

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Significance analysis of time course microarray experiments

22 September 2017

1 reference

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WebGestalt: an integrated system for exploring gene sets in various biological contexts

22 September 2017

1 reference

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PAGE: parametric analysis of gene set enrichment

22 September 2017

1 reference

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Significance analysis of functional categories in gene expression studies: a structured permutation approach

22 September 2017

1 reference

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Gene expression profile analysis of mouse colon embryonic development

22 September 2017

1 reference

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Bioconductor: open software development for computational biology and bioinformatics

22 September 2017

1 reference

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GOTree Machine (GOTM): a web-based platform for interpreting sets of interesting genes using Gene Ontology hierarchies

22 September 2017

1 reference

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Model-based methods for identifying periodically expressed genes based on time course microarray gene expression data

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2861317

A global test for groups of genes: testing association with a clinical outcome

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2861317

Exploration, normalization, and summaries of high density oligonucleotide array probe level data

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2861317

Onto-Tools, the toolkit of the modern biologist: Onto-Express, Onto-Compare, Onto-Design and Onto-Translate

22 September 2017

1 reference

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PGC-1alpha-responsive genes involved in oxidative phosphorylation are coordinately downregulated in human diabetes

22 September 2017

1 reference

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GenMAPP, a new tool for viewing and analyzing microarray data on biological pathways

22 September 2017

1 reference

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Assessing gene significance from cDNA microarray expression data via mixed models

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2861317

Changes in global gene expression patterns during development and maturation of the rat kidney

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2861317

Gene ontology: tool for the unification of biology

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2861317

Naive application of permutation testing leads to inflated type I error rates

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2861317

GlobalANCOVA: exploration and assessment of gene group effects.

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2861317

A systematic statistical linear modeling approach to oligonucleotide array experiments

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2861317

Statistical tests for identifying differentially expressed genes in time-course microarray experiments

20 August 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19954419

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.2202/1544-6115.1484

1 reference

18 September 2017

1 reference

18 September 2017

1 reference