(Q40306265)

English

Calculation of the entropy and free energy of peptides by molecular dynamics simulations using the hypothetical scanning molecular dynamics method

scientific article published on July 2006

In more languages

Statements

scholarly article

1 reference

Europe PubMed Central

19 September 2017

Calculation of the entropy and free energy of peptides by molecular dynamics simulations using the hypothetical scanning molecular dynamics method (English)

1 reference

Europe PubMed Central

19 September 2017

author name string

Srinath Cheluvaraja

1

1 reference

Europe PubMed Central

19 September 2017

Hagai Meirovitch

2

1 reference

Europe PubMed Central

19 September 2017

language of work or name

0 references

publication date

1 July 2006

1 reference

Europe PubMed Central

19 September 2017

Journal of Chemical Physics

1 reference

Europe PubMed Central

19 September 2017

125

1 reference

Europe PubMed Central

19 September 2017

2

1 reference

Europe PubMed Central

19 September 2017

24905

1 reference

Europe PubMed Central

19 September 2017

describes a project that uses

molecular dynamics simulation

1 reference

based on heuristic

inferred from title

Studies in Molecular Dynamics. I. General Method

1 reference

https://api.crossref.org/works/10.1063%2F1.2208608

21 January 2018

Dynamics of folded proteins

1 reference

https://api.crossref.org/works/10.1063%2F1.2208608

21 January 2018

Structural evidence for induced fit as a mechanism for antibody-antigen recognition

1 reference

https://api.crossref.org/works/10.1063%2F1.2208608

21 January 2018

Backbone and side chain dynamics of uncomplexed human adipocyte and muscle fatty acid-binding proteins.

1 reference

https://api.crossref.org/works/10.1063%2F1.2208608

21 January 2018

Equation of State Calculations by Fast Computing Machines

1 reference

https://api.crossref.org/works/10.1063%2F1.2208608

21 January 2018

beta-Hairpins, alpha-helices, and the intermediates among the secondary structures in the energy landscape of a peptide from a distal beta-hairpin of SH3 domain

1 reference

https://api.crossref.org/works/10.1063%2F1.2208608

21 January 2018

Nonequilibrium Equality for Free Energy Differences

1 reference

https://api.crossref.org/works/10.1063%2F1.2208608

21 January 2018

Single-step perturbations to calculate free energy differences from unphysical reference states: limits on size, flexibility, and character

1 reference

https://api.crossref.org/works/10.1063%2F1.2208608

21 January 2018

Pathways to a protein folding intermediate observed in a 1-microsecond simulation in aqueous solution

1 reference

https://api.crossref.org/works/10.1063%2F1.2208608

21 January 2018

Computer simulation of the free energy of peptides with the local states method: analogues of gonadotropin releasing hormone in the random coil and stable states

1 reference

https://api.crossref.org/works/10.1063%2F1.2208608

21 January 2018

Lower and upper bounds for the absolute free energy by the hypothetical scanning Monte Carlo method: application to liquid argon and water.

1 reference

https://api.crossref.org/works/10.1063%2F1.2208608

21 January 2018

A simulation method for calculating the absolute entropy and free energy of fluids: application to liquid argon and water

1 reference

https://api.crossref.org/works/10.1063%2F1.2208608

21 January 2018

Simulation method for calculating the entropy and free energy of peptides and proteins

1 reference

https://api.crossref.org/works/10.1063%2F1.2208608

21 January 2018

Calculation of the entropy and free energy by the hypothetical scanning Monte Carlo method: application to peptides

1 reference

https://api.crossref.org/works/10.1063%2F1.2208608

21 January 2018

Calculation of the entropy and free energy from monte carlo simulations of a peptide stretched by an external force

1 reference

https://api.crossref.org/works/10.1063%2F1.2208608

21 January 2018

Calculation of the Entropy of Lattice Polymer Models from Monte Carlo Trajectories

1 reference

https://api.crossref.org/works/10.1063%2F1.2208608

21 January 2018

Calculation of the entropy of random coil polymers with the hypothetical scanning Monte Carlo method

1 reference

https://api.crossref.org/works/10.1063%2F1.2208608

21 January 2018

A Second Generation Force Field for the Simulation of Proteins, Nucleic Acids, and Organic Molecules

1 reference

https://api.crossref.org/works/10.1063%2F1.2208608

21 January 2018

Estimation of binding affinities for HEPT and nevirapine analogues with HIV-1 reverse transcriptase via Monte Carlo simulations

1 reference

https://api.crossref.org/works/10.1063%2F1.2208608

21 January 2018

Monte Carlo simulations of biomolecules: The MC module in CHARMM.

1 reference

https://api.crossref.org/works/10.1063%2F1.2208608

21 January 2018

Free energy based populations of interconverting microstates of a cyclic peptide lead to the experimental NMR data

1 reference

https://api.crossref.org/works/10.1063%2F1.2208608

21 January 2018

Evaluating the Accuracy of the Quasiharmonic Approximation

1 reference

https://api.crossref.org/works/10.1063%2F1.2208608

21 January 2018

Free energy via molecular simulation: applications to chemical and biomolecular systems

1 reference

https://api.crossref.org/works/10.1063%2F1.2208608

21 January 2018

High‐Temperature Equation of State by a Perturbation Method. I. Nonpolar Gases

1 reference

https://api.crossref.org/works/10.1063%2F1.2208608

21 January 2018

Identifiers

10.1063/1.2208608

1 reference

Europe PubMed Central

19 September 2017

1 reference

Europe PubMed Central

19 September 2017

ResearchGate publication ID

0 references

Sitelinks

Wikipedia(0 entries)

Wikibooks(0 entries)

Wikinews(0 entries)

Wikiquote(0 entries)

Wikisource(0 entries)

Wikiversity(0 entries)

Wikivoyage(0 entries)

Wiktionary(0 entries)

Multilingual sites(0 entries)

Retrieved from "https://www.wikidata.org/w/index.php?title=Q40306265&oldid=1894228347"