(Q40311724)

19 September 2017

title

Identification of cellular factors associated with the 3'-nontranslated region of the hepatitis C virus genome (English)

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19 September 2017

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Dylan Harris

1

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19 September 2017

Zhengbin Zhang

series ordinal

2

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19 September 2017

Binay Chaubey

series ordinal

3

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19 September 2017

Virendra N Pandey

series ordinal

4

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19 September 2017

publication date

24 February 2006

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Molecular & Cellular Proteomics

19 September 2017

published in

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19 September 2017

volume

5

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19 September 2017

issue

6

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19 September 2017

page(s)

1006-1018

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Isolation of a cDNA clone derived from a blood-borne non-A, non-B viral hepatitis genome

19 September 2017

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Template requirements for de novo RNA synthesis by hepatitis C virus nonstructural protein 5B polymerase on the viral X RNA

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Selection of 3'-template bases and initiating nucleotides by hepatitis C virus NS5B RNA-dependent RNA polymerase

21 January 2018

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A novel mechanism to ensure terminal initiation by hepatitis C virus NS5B polymerase

21 January 2018

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Replication of subgenomic hepatitis C virus RNAs in a hepatoma cell line

21 January 2018

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Enhancement of hepatitis C virus RNA replication by cell culture-adaptive mutations

21 January 2018

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Efficient initiation of HCV RNA replication in cell culture

21 January 2018

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Highly permissive cell lines for subgenomic and genomic hepatitis C virus RNA replication

21 January 2018

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Hepatitis C virus-encoded enzymatic activities and conserved RNA elements in the 3' nontranslated region are essential for virus replication in vivo

21 January 2018

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3' nontranslated RNA signals required for replication of hepatitis C virus RNA

21 January 2018

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Genetic Analysis of Sequences in the 3' Nontranslated Region of Hepatitis C Virus That Are Important for RNA Replication

21 January 2018

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Genetic analysis of internal ribosomal entry site on hepatitis C virus RNA: implication for involvement of the highly ordered structure and cell type-specific transacting factors

21 January 2018

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Demonstration of functional requirement of polypyrimidine tract-binding protein by SELEX RNA during hepatitis C virus internal ribosome entry site-mediated translation initiation

21 January 2018

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https://api.crossref.org/works/10.1074%2FMCP.M500429-MCP200

An internal polypyrimidine-tract-binding protein-binding site in the hepatitis C virus RNA attenuates translation, which is relieved by the 3'-untranslated sequence

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M500429-MCP200

Identification of eIF2Bgamma and eIF2gamma as cofactors of hepatitis C virus internal ribosome entry site-mediated translation using a functional genomics approach

21 January 2018

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https://api.crossref.org/works/10.1074%2FMCP.M500429-MCP200

Heterogeneous nuclear ribonucleoprotein I (hnRNP-I/PTB) selectively binds the conserved 3' terminus of hepatitis C viral RNA.

21 January 2018

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https://api.crossref.org/works/10.1074%2FMCP.M500429-MCP200

hnRNP C and polypyrimidine tract-binding protein specifically interact with the pyrimidine-rich region within the 3'NTR of the HCV RNA genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M500429-MCP200

Binding of the La autoantigen to the hepatitis C virus 3' untranslated region protects the RNA from rapid degradation in vitro

21 January 2018

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https://api.crossref.org/works/10.1074%2FMCP.M500429-MCP200

HuR, a protein implicated in oncogene and growth factor mRNA decay, binds to the 3' ends of hepatitis C virus RNA of both polarities

21 January 2018

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https://api.crossref.org/works/10.1074%2FMCP.M500429-MCP200

In vivo analysis of the 3' untranslated region of the hepatitis C virus after in vitro mutagenesis of an infectious cDNA clone

21 January 2018

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https://api.crossref.org/works/10.1074%2FMCP.M500429-MCP200

Subgenomic hepatitis C virus replicons inducing expression of a secreted enzymatic reporter protein

21 January 2018

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https://api.crossref.org/works/10.1074%2FMCP.M500429-MCP200

Accurate transcription initiation by RNA polymerase II in a soluble extract from isolated mammalian nuclei

21 January 2018

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https://api.crossref.org/works/10.1074%2FMCP.M500429-MCP200

DNA affinity capture and protein profiling by SELDI-TOF mass spectrometry: effect of DNA methylation

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M500429-MCP200

Two-step affinity purification of the hepatitis C virus ribonucleoprotein complex

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M500429-MCP200

Biotin and fluorescent labeling of RNA using T4 RNA ligase

21 January 2018

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https://api.crossref.org/works/10.1074%2FMCP.M500429-MCP200

Synthesis of adenosine derivatives as transcription initiators and preparation of 5′ fluorescein- and biotin-labeled RNA through one-step in vitro transcription

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M500429-MCP200

Human hepatic glyceraldehyde-3-phosphate dehydrogenase binds to the poly(U) tract of the 3' non-coding region of hepatitis C virus genomic RNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M500429-MCP200

Members of the NF90/NFAR protein group are involved in the life cycle of a positive-strand RNA virus

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M500429-MCP200

Characterization of cDNAs encoding the polypyrimidine tract-binding protein

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M500429-MCP200

hnRNP 1, the polyprimidine tract-binding protein: distinct nuclear localization and association with hnRNAs

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M500429-MCP200

A DEAD box protein facilitates HIV-1 replication as a cellular co-factor of Rev.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M500429-MCP200

Requirement of DDX3 DEAD box RNA helicase for HIV-1 Rev-RRE export function

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M500429-MCP200

21 January 2018

HuR and mRNA stability

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M500429-MCP200

Concurrent versus individual binding of HuR and AUF1 to common labile target mRNAs

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M500429-MCP200

RNA stabilization by the AU-rich element binding protein, HuR, an ELAV protein

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M500429-MCP200

Analysis of site-specific protein–RNA cross-links in isolated RNP complexes, combining affinity selection and mass spectrometry

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M500429-MCP200

Comprehensive proteomic analysis of the human spliceosome

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M500429-MCP200

Selective degradation of AU-rich mRNAs promoted by the p37 AUF1 protein isoform

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M500429-MCP200

Regulation of human vascular endothelial growth factor mRNA stability in hypoxia by heterogeneous nuclear ribonucleoprotein L

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M500429-MCP200

A KH domain RNA binding protein, KSRP, promotes ARE-directed mRNA turnover by recruiting the degradation machinery

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M500429-MCP200

hnRNP C increases amyloid precursor protein (APP) production by stabilizing APP mRNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M500429-MCP200

Nuclear export of NF90 is required for interleukin-2 mRNA stabilization

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M500429-MCP200

The RNP domain: a sequence-specific RNA-binding domain involved in processing and transport of RNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M500429-MCP200

Cloning and characterization of a single-stranded DNA binding protein that specifically recognizes deoxycytidine stretch

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M500429-MCP200

Characterization and primary structure of the poly(C)-binding heterogeneous nuclear ribonucleoprotein complex K protein

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M500429-MCP200

Heterogeneous nuclear ribonucleoprotein K is a DNA-binding transactivator

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M500429-MCP200

Activating transcription from single stranded DNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M500429-MCP200

The pre-mRNA binding K protein contains a novel evolutionarily conserved motif

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M500429-MCP200

The solution structure of the first KH domain of FMR1, the protein responsible for the fragile X syndrome

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M500429-MCP200

High precision solution structure of the C-terminal KH domain of heterogeneous nuclear ribonucleoprotein K, a c-myc transcription factor

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M500429-MCP200

Crystal structures of Nova-1 and Nova-2 K-homology RNA-binding domains

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M500429-MCP200

Hepatitis C virus core protein interacts with heterogeneous nuclear ribonucleoprotein K

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M500429-MCP200

Telomere elongation by hnRNP A1 and a derivative that interacts with telomeric repeats and telomerase

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M500429-MCP200

Heterogeneous nuclear ribonucleoprotein a1 binds to the 3'-untranslated region and mediates potential 5'-3'-end cross talks of mouse hepatitis virus RNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M500429-MCP200

A Janus splicing regulatory element modulates HIV-1 tat and rev mRNA production by coordination of hnRNP A1 cooperative binding.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M500429-MCP200

Characterization and molecular cloning of polypyrimidine tract-binding protein: a component of a complex necessary for pre-mRNA splicing

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M500429-MCP200

Delineation of a novel pathway that regulates CD154 (CD40 ligand) expression

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M500429-MCP200

Identification of a group of cellular cofactors that stimulate the binding of RNA polymerase II and TRP-185 to human immunodeficiency virus 1 TAR RNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M500429-MCP200

Cloning and characterization of PSF, a novel pre-mRNA splicing factor

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M500429-MCP200

PSF acts through the human immunodeficiency virus type 1 mRNA instability elements to regulate virus expression

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M500429-MCP200

Double-strand break repair by Ku70 requires heterodimerization with Ku80 and DNA binding functions

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M500429-MCP200

Human Ku70/80 associates physically with telomerase through interaction with hTERT

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M500429-MCP200

Role of the non-homologous DNA end joining pathway in the early steps of retroviral infection

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M500429-MCP200

ROD1, a novel gene conferring multiple resistance phenotypes in Saccharomyces cerevisiae.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M500429-MCP200

Isolation of a mammalian homologue of a fission yeast differentiation regulator

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M500429-MCP200

staufen, a gene required to localize maternal RNAs in the Drosophila egg

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M500429-MCP200

A conserved double-stranded RNA-binding domain

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M500429-MCP200

Interaction of influenza virus NS1 protein and the human homologue of Staufen in vivo and in vitro

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M500429-MCP200

Staufen protein associates with the 3'UTR of bicoid mRNA to form particles that move in a microtubule-dependent manner.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M500429-MCP200

Identification of Staufen in the human immunodeficiency virus type 1 Gag ribonucleoprotein complex and a role in generating infectious viral particles

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M500429-MCP200

DNA-dependent protein kinase interacts with antigen receptor response element binding proteins NF90 and NF45

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M500429-MCP200

The RNA binding protein nuclear factor 90 functions as both a positive and negative regulator of gene expression in mammalian cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M500429-MCP200

Identification of two proteins that bind to a pyrimidine-rich sequence in the 3'-untranslated region of GAP-43 mRNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M500429-MCP200

Identification of human DNA helicase V with the far upstream element-binding protein

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M500429-MCP200

The far upstream element-binding proteins comprise an ancient family of single-strand DNA-binding transactivators

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M500429-MCP200

A sequence-specific, single-strand binding protein activates the far upstream element of c-myc and defines a new DNA-binding motif

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M500429-MCP200

Structure and dynamics of KH domains from FBP bound to single-stranded DNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M500429-MCP200

Heat-shock protein 70 can replace viral protein R of HIV-1 during nuclear import of the viral preintegration complex

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M500429-MCP200

Specific incorporation of heat shock protein 70 family members into primate lentiviral virions

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M500429-MCP200

Domain structure of human nuclear DNA helicase II (RNA helicase A)

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M500429-MCP200

Nuclear DNA helicase II unwinds both DNA and RNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M500429-MCP200

Diverse cellular transformation capability of overexpressed genes in human hepatocellular carcinoma

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M500429-MCP200

AU-rich elements: characterization and importance in mRNA degradation

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M500429-MCP200

ARED: human AU-rich element-containing mRNA database reveals an unexpectedly diverse functional repertoire of encoded proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M500429-MCP200

10.1074/MCP.M500429-MCP200

21 January 2018

Identifiers

DOI

1 reference

release_cvrmjzta2ndatdgmorjze45nbi

19 September 2017

Fatcat ID

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/cvrmjzta2ndatdgmorjze45nbi

mapped directly with Wikidata item

24 November 2022

based on heuristic

1 reference