(Q40342981)

English

Chromatin immunoprecipitation identifies photoreceptor transcription factor targets in mouse models of retinal degeneration: new findings and challenges

scientific article published on September 2005

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scholarly article

1 reference

Europe PubMed Central

PubMed publication ID

19 September 2017

Chromatin immunoprecipitation identifies photoreceptor transcription factor targets in mouse models of retinal degeneration: new findings and challenges (English)

1 reference

Europe PubMed Central

PubMed publication ID

19 September 2017

photoreceptor protein

0 references

retinal degeneration

1 reference

based on heuristic

inferred from title

author name string

Guang-Hua Peng

1

1 reference

Europe PubMed Central

PubMed publication ID

19 September 2017

Shiming Chen

2

1 reference

Europe PubMed Central

PubMed publication ID

19 September 2017

publication date

1 September 2005

1 reference

Europe PubMed Central

PubMed publication ID

19 September 2017

Visual neuroscience

1 reference

Europe PubMed Central

PubMed publication ID

19 September 2017

22

1 reference

Europe PubMed Central

PubMed publication ID

19 September 2017

5

1 reference

Europe PubMed Central

PubMed publication ID

19 September 2017

575-586

1 reference

Europe PubMed Central

PubMed publication ID

19 September 2017

High-throughput SELEX SAGE method for quantitative modeling of transcription-factor binding sites.

1 reference

https://api.crossref.org/works/10.1017%2FS0952523805225063

21 January 2018

Dominant Leber congenital amaurosis, cone-rod degeneration, and retinitis pigmentosa caused by mutant versions of the transcription factor CRX.

1 reference

https://api.crossref.org/works/10.1017%2FS0952523805225063

21 January 2018

E2F integrates cell cycle progression with DNA repair, replication, and G(2)/M checkpoints

1 reference

https://api.crossref.org/works/10.1017%2FS0952523805225063

21 January 2018

The basic motif-leucine zipper transcription factor Nrl can positively regulate rhodopsin gene expression

1 reference

https://api.crossref.org/works/10.1017%2FS0952523805225063

21 January 2018

Functional analysis of the rod photoreceptor cGMP phosphodiesterase alpha-subunit gene promoter: Nrl and Crx are required for full transcriptional activity

1 reference

https://api.crossref.org/works/10.1017%2FS0952523805225063

21 January 2018

The photoreceptor-specific nuclear receptor Nr2e3 interacts with Crx and exerts opposing effects on the transcription of rod versus cone genes

1 reference

https://api.crossref.org/works/10.1017%2FS0952523805225063

21 January 2018

Control of pancreas and liver gene expression by HNF transcription factors

1 reference

https://api.crossref.org/works/10.1017%2FS0952523805225063

21 January 2018

Otx2 homeobox gene controls retinal photoreceptor cell fate and pineal gland development

1 reference

https://api.crossref.org/works/10.1017%2FS0952523805225063

21 January 2018

The mouse homeodomain protein OTX2 regulates NCAM promoter activity

1 reference

https://api.crossref.org/works/10.1017%2FS0952523805225063

21 January 2018

The leucine zipper of NRL interacts with the CRX homeodomain. A possible mechanism of transcriptional synergy in rhodopsin regulation

1 reference

https://api.crossref.org/works/10.1017%2FS0952523805225063

21 January 2018

The nuclear receptor NR2E3 plays a role in human retinal photoreceptor differentiation and degeneration

1 reference

https://api.crossref.org/works/10.1017%2FS0952523805225063

21 January 2018

Nrl is required for rod photoreceptor development

1 reference

https://api.crossref.org/works/10.1017%2FS0952523805225063

21 January 2018

Distribution of NF-kappaB-binding sites across human chromosome 22

1 reference

https://api.crossref.org/works/10.1017%2FS0952523805225063

21 January 2018

OTX2 activates the molecular network underlying retina pigment epithelium differentiation

1 reference

https://api.crossref.org/works/10.1017%2FS0952523805225063

21 January 2018

Analysis of Myc bound loci identified by CpG island arrays shows that Max is essential for Myc-dependent repression

1 reference

https://api.crossref.org/works/10.1017%2FS0952523805225063

21 January 2018

Determination of the consensus binding sequence for the purified embryonic heat shock factor 2.

1 reference

https://api.crossref.org/works/10.1017%2FS0952523805225063

21 January 2018

Microarray analysis of the transcriptional network controlled by the photoreceptor homeobox gene Crx.

1 reference

https://api.crossref.org/works/10.1017%2FS0952523805225063

21 January 2018

Polyglutamine-expanded ataxin-7 antagonizes CRX function and induces cone-rod dystrophy in a mouse model of SCA7

1 reference

https://api.crossref.org/works/10.1017%2FS0952523805225063

21 January 2018

The bZIP transcription factor Nrl stimulates rhodopsin promoter activity in primary retinal cell cultures

1 reference

https://api.crossref.org/works/10.1017%2FS0952523805225063

21 January 2018

Identification of a photoreceptor cell-specific nuclear receptor

1 reference

https://api.crossref.org/works/10.1017%2FS0952523805225063

21 January 2018

Silencing of human polycomb target genes is associated with methylation of histone H3 Lys 27.

1 reference

https://api.crossref.org/works/10.1017%2FS0952523805225063

21 January 2018

Defining the CREB regulon: a genome-wide analysis of transcription factor regulatory regions.

1 reference

https://api.crossref.org/works/10.1017%2FS0952523805225063

21 January 2018

A Chromatin Immunoprecipitation Screen Reveals Protein Kinase Cβ as a Direct RUNX1 Target Gene

1 reference

https://api.crossref.org/works/10.1017%2FS0952523805225063

21 January 2018

Excess cone cell proliferation due to lack of a functional NR2E3 causes retinal dysplasia and degeneration in rd7/rd7 mice

1 reference

https://api.crossref.org/works/10.1017%2FS0952523805225063

21 January 2018

Mutation of a nuclear receptor gene, NR2E3, causes enhanced S cone syndrome, a disorder of retinal cell fate.

1 reference

https://api.crossref.org/works/10.1017%2FS0952523805225063

21 January 2018

Developmentally regulated gene expression of all eight metabotropic glutamate receptors in hypothalamic suprachiasmatic and arcuate nuclei--a PCR analysis

1 reference

https://api.crossref.org/works/10.1017%2FS0952523805225063

21 January 2018

Retinopathy and attenuated circadian entrainment in Crx-deficient mice.

1 reference

https://api.crossref.org/works/10.1017%2FS0952523805225063

21 January 2018

Crx, a novel otx-like homeobox gene, shows photoreceptor-specific expression and regulates photoreceptor differentiation.

1 reference

https://api.crossref.org/works/10.1017%2FS0952523805225063

21 January 2018

De novo mutations in the CRX homeobox gene associated with Leber congenital amaurosis

1 reference

https://api.crossref.org/works/10.1017%2FS0952523805225063

21 January 2018

Cone-rod dystrophy due to mutations in a novel photoreceptor-specific homeobox gene (CRX) essential for maintenance of the photoreceptor

1 reference

https://api.crossref.org/works/10.1017%2FS0952523805225063

21 January 2018

Elements regulating the transcription of human interstitial retinoid-binding protein (IRBP) gene in cultured retinoblastoma cells

1 reference

https://api.crossref.org/works/10.1017%2FS0952523805225063

21 January 2018

Functional dissection of the promoter of the interphotoreceptor retinoid-binding protein gene: the cone-rod-homeobox element is essential for photoreceptor-specific expression in vivo

1 reference

https://api.crossref.org/works/10.1017%2FS0952523805225063

21 January 2018

CREB binds to multiple loci on human chromosome 22.

1 reference

https://api.crossref.org/works/10.1017%2FS0952523805225063

21 January 2018

Rb regulates proliferation and rod photoreceptor development in the mouse retina

1 reference

https://api.crossref.org/works/10.1017%2FS0952523805225063

21 January 2018

Photoreceptor-specific nuclear receptor NR2E3 functions as a transcriptional activator in rod photoreceptors

1 reference

https://api.crossref.org/works/10.1017%2FS0952523805225063

21 January 2018

Ret 4, a positive acting rhodopsin regulatory element identified using a bovine retina in vitro transcription system

1 reference

https://api.crossref.org/works/10.1017%2FS0952523805225063

21 January 2018

Functional analysis of cone-rod homeobox (CRX) mutations associated with retinal dystrophy

1 reference

https://api.crossref.org/works/10.1017%2FS0952523805225063

21 January 2018

Crx, a novel Otx-like paired-homeodomain protein, binds to and transactivates photoreceptor cell-specific genes

1 reference

https://api.crossref.org/works/10.1017%2FS0952523805225063

21 January 2018

Seeing the unseen: Microarray-based gene expression profiling in vision

1 reference

https://api.crossref.org/works/10.1017%2FS0952523805225063

21 January 2018

Interference of Crx-dependent transcription by ataxin-7 involves interaction between the glutamine regions and requires the ataxin-7 carboxy-terminal region for nuclear localization

1 reference

https://api.crossref.org/works/10.1017%2FS0952523805225063

21 January 2018

Altered expression of genes of the Bmp/Smad and Wnt/calcium signaling pathways in the cone-only Nrl-/- mouse retina, revealed by gene profiling using custom cDNA microarrays

1 reference

https://api.crossref.org/works/10.1017%2FS0952523805225063

21 January 2018

Unbiased mapping of transcription factor binding sites along human chromosomes 21 and 22 points to widespread regulation of noncoding RNAs

1 reference

https://api.crossref.org/works/10.1017%2FS0952523805225063

21 January 2018

Expression profiling of the developing and mature Nrl-/- mouse retina: identification of retinal disease candidates and transcriptional regulatory targets of Nrl

1 reference

https://api.crossref.org/works/10.1017%2FS0952523805225063

21 January 2018

Requirement of neuroD for photoreceptor formation in the chick retina

1 reference

https://api.crossref.org/works/10.1017%2FS0952523805225063

21 January 2018

Interstitial retinol-binding protein and cellular retinal-binding protein in the mammalian pineal

1 reference

https://api.crossref.org/works/10.1017%2FS0952523805225063

21 January 2018

Identification of novel pRb binding sites using CpG microarrays suggests that E2F recruits pRb to specific genomic sites during S phase

1 reference

https://api.crossref.org/works/10.1017%2FS0952523805225063

21 January 2018

Binding properties of the human homeodomain protein OTX2 to a DNA target sequence

1 reference

https://api.crossref.org/works/10.1017%2FS0952523805225063

21 January 2018

The identification of E2F1-specific target genes

1 reference

https://api.crossref.org/works/10.1017%2FS0952523805225063

21 January 2018

Characterizing transcription factor binding sites using formaldehyde crosslinking and immunoprecipitation

1 reference

https://api.crossref.org/works/10.1017%2FS0952523805225063

21 January 2018

Isolating human transcription factor targets by coupling chromatin immunoprecipitation and CpG island microarray analysis

1 reference

https://api.crossref.org/works/10.1017%2FS0952523805225063

21 January 2018

Use of chromatin immunoprecipitation to clone novel E2F target promoters

1 reference

https://api.crossref.org/works/10.1017%2FS0952523805225063

21 January 2018

A locus control region adjacent to the human red and green visual pigment genes

1 reference

https://api.crossref.org/works/10.1017%2FS0952523805225063

21 January 2018

Retinal degeneration in the rd mouse is caused by a defect in the beta subunit of rod cGMP-phosphodiesterase

1 reference

https://api.crossref.org/works/10.1017%2FS0952523805225063

21 January 2018

OTX2 homeodomain protein binds a DNA element necessary for interphotoreceptor retinoid binding protein gene expression

1 reference

https://api.crossref.org/works/10.1017%2FS0952523805225063

21 January 2018

Comprehensive analysis of photoreceptor gene expression and the identification of candidate retinal disease genes

1 reference

https://api.crossref.org/works/10.1017%2FS0952523805225063

21 January 2018

The subcellular localization of Otx2 is cell-type specific and developmentally regulated in the mouse retina

1 reference

https://api.crossref.org/works/10.1017%2FS0952523805225063

21 January 2018

Barrier to autointegration factor interacts with the cone-rod homeobox and represses its transactivation function

1 reference

https://api.crossref.org/works/10.1017%2FS0952523805225063

21 January 2018

Bilateral retinal and brain tumors in transgenic mice expressing simian virus 40 large T antigen under control of the human interphotoreceptor retinoid-binding protein promoter

1 reference

https://api.crossref.org/works/10.1017%2FS0952523805225063

21 January 2018

Serial analysis of gene expression

1 reference

https://api.crossref.org/works/10.1017%2FS0952523805225063

21 January 2018

A deletion in a photoreceptor-specific nuclear receptor mRNA causes retinal degeneration in the rd7 mouse

1 reference

https://api.crossref.org/works/10.1017%2FS0952523805225063

21 January 2018

A conserved retina-specific gene encodes a basic motif/leucine zipper domain

1 reference

https://api.crossref.org/works/10.1017%2FS0952523805225063

21 January 2018

Leber congenital amaurosis caused by a homozygous mutation (R90W) in the homeodomain of the retinal transcription factor CRX: direct evidence for the involvement of CRX in the development of photoreceptor function

1 reference

https://api.crossref.org/works/10.1017%2FS0952523805225063

21 January 2018

Mutations in the cone-rod homeobox gene are associated with the cone-rod dystrophy photoreceptor degeneration

1 reference

https://api.crossref.org/works/10.1017%2FS0952523805225063

21 January 2018

A novel signaling pathway from rod photoreceptors to ganglion cells in mammalian retina

1 reference

https://api.crossref.org/works/10.1017%2FS0952523805225063

21 January 2018

Nested expression domains of four homeobox genes in developing rostral brain

1 reference

https://api.crossref.org/works/10.1017%2FS0952523805225063

21 January 2018

Induction of photoreceptor-specific phenotypes in adult mammalian iris tissue

1 reference

https://api.crossref.org/works/10.1017%2FS0952523805225063

7 January 2021

based on heuristic

inferred from DOI database lookup

Genomic approaches that aid in the identification of transcription factor target genes.

1 reference

https://api.crossref.org/works/10.1017%2FS0952523805225063

7 January 2021

based on heuristic

inferred from DOI database lookup

The mouse albumin promoter and a distal upstream site are simultaneously DNase I hypersensitive in liver chromatin and bind similar liver-abundant factors in vitro

1 reference

https://api.crossref.org/works/10.1017%2FS0952523805225063

7 January 2021

based on heuristic

inferred from DOI database lookup

RER, an Evolutionarily Conserved Sequence Upstream of the Rhodopsin Gene, Has Enhancer Activity

1 reference

https://api.crossref.org/works/10.1017%2FS0952523805225063

7 January 2021

based on heuristic

inferred from DOI database lookup

Cloning and characterization of retinal transcription factors, using target site-based methodology

1 reference

https://api.crossref.org/works/10.1017%2FS0952523805225063

7 January 2021

based on heuristic

inferred from DOI database lookup

Implication of OTX2 in pigment epithelium determination and neural retina differentiation.

1 reference

https://api.crossref.org/works/10.1017%2FS0952523805225063

7 January 2021

based on heuristic

inferred from DOI database lookup

A thyroid hormone receptor that is required for the development of green cone photoreceptors

1 reference

https://api.crossref.org/works/10.1017%2FS0952523805225063

7 January 2021

based on heuristic

inferred from DOI database lookup

The mGluR6 5' upstream transgene sequence directs a cell-specific and developmentally regulated expression in retinal rod and ON-type cone bipolar cells

1 reference

https://api.crossref.org/works/10.1017%2FS0952523805225063

7 January 2021

based on heuristic

inferred from DOI database lookup

Prevalence of mutations causing retinitis pigmentosa and other inherited retinopathies

1 reference

https://api.crossref.org/works/10.1017%2FS0952523805225063

7 January 2021

based on heuristic

inferred from DOI database lookup

Identifiers

10.1017/S0952523805225063

1 reference

Europe PubMed Central

PubMed publication ID

19 September 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

19 September 2017

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