(Q40399774)

20 September 2017

Development of self-compressing BLSOM for comprehensive analysis of big sequence data (English)

1 reference

20 September 2017

Akihito Kikuchi

1

1 reference

20 September 2017

Toshimichi Ikemura

series ordinal

2

1 reference

20 September 2017

Takashi Abe

series ordinal

3

1 reference

20 September 2017

language of work or name

English

0 references

publication date

1 October 2015

1 reference

BioMed Research International

20 September 2017

1 reference

20 September 2017

2015

1 reference

20 September 2017

506052

1 reference

Creative Commons Attribution 3.0 Unported

20 September 2017

start time

1 January 2015

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

1 reference

April 2022 Public Data File from Crossref

cites work

A novel approach, based on BLSOMs (Batch Learning Self-Organizing Maps), to the microbiome analysis of ticks.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4606171

Microbial lifestyle and genome signatures

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4606171

A new database (GCD) on genome composition for eukaryote and prokaryote genome sequences and their initial analyses

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4606171

Prediction of directional changes of influenza A virus genome sequences with emphasis on pandemic H1N1/09 as a model case

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4606171

A novel method of characterizing genetic sequences: genome space with biological distance and applications

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4606171

Practical application of self-organizing maps to interrelate biodiversity and functional data in NGS-based metagenomics

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4606171

Distinguishing microbial genome fragments based on their composition: evolutionary and comparative genomic perspectives

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4606171

Community-wide analysis of microbial genome sequence signatures

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4606171

Using Mahalanobis distance to compare genomic signatures between bacterial plasmids and chromosomes.

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4606171

Substrate-induced gene-expression screening of environmental metagenome libraries for isolation of catabolic genes

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4606171

Application of tetranucleotide frequencies for the assignment of genomic fragments

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4606171

Informatics for unveiling hidden genome signatures

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4606171

Evolutionary implications of microbial genome tetranucleotide frequency biases

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4606171

Analysis of codon usage diversity of bacterial genes with a self-organizing map (SOM): characterization of horizontally transferred genes with emphasis on the E. coli O157 genome

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4606171

Codon catalog usage and the genome hypothesis

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4606171

A novel bioinformatics strategy for function prediction of poorly-characterized protein genes obtained from metagenome analyses

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4606171

Using growing self-organising maps to improve the binning process in environmental whole-genome shotgun sequencing

15 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4606171

Phylogenetic diversity of gene sequences isolated from the rumen as analysed using a self-organizing map (SOM).

15 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4606171

Hyperbolic SOM-based clustering of DNA fragment features for taxonomic visualization and classification.

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4606171

Novel phylogenetic studies of genomic sequence fragments derived from uncultured microbe mixtures in environmental and clinical samples.

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4606171

Self-Organized Formation of Topologically Correct Feature Maps

20 August 2018

1 reference

Crossref

https://api.crossref.org/works/10.1155%2F2015%2F506052

21 January 2018

Identifiers

DOI

10.1155/2015/506052

1 reference

20 September 2017

1 reference

20 September 2017

PubMed publication ID

26495297

1 reference