(Q40447871)

English

A difference in the importance of bulged nucleotides and their parent base pairs in the binding of transcription factor IIIA to Xenopus 5S RNA and 5S RNA genes

scientific article

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scholarly article

1 reference

Europe PubMed Central

PMC publication ID

20 September 2017

A difference in the importance of bulged nucleotides and their parent base pairs in the binding of transcription factor IIIA to Xenopus 5S RNA and 5S RNA genes (English)

1 reference

Europe PubMed Central

PMC publication ID

20 September 2017

author name string

Baudin F

1

1 reference

Europe PubMed Central

PMC publication ID

20 September 2017

Romaniuk PJ

2

1 reference

Europe PubMed Central

PMC publication ID

20 September 2017

publication date

1 March 1989

1 reference

Europe PubMed Central

PMC publication ID

20 September 2017

Nucleic Acids Research

1 reference

Europe PubMed Central

PMC publication ID

20 September 2017

17

1 reference

Europe PubMed Central

PMC publication ID

20 September 2017

5

1 reference

Europe PubMed Central

PMC publication ID

20 September 2017

2043-2056

1 reference

Europe PubMed Central

PMC publication ID

20 September 2017

Generalized structures of the 5S ribosomal RNAs

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317541

22 September 2017

A "bulged" double helix in a RNA-protein contact site.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317541

22 September 2017

Cooperative model for the binding of Xenopus transcription factor A to the 5S RNA gene

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317541

22 September 2017

Structural requirements for the interaction of 5S rRNA with the eukaryotic transcription factor IIIA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317541

22 September 2017

Cloning and expression of the gene for bacteriophage T7 RNA polymerase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317541

22 September 2017

Binding ofXenopustranscription factor A to 5S RNA and to single stranded DNA

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317541

22 September 2017

Specific interaction of a purified transcription factor with an internal control region of 5S RNA genes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317541

22 September 2017

Repetitive zinc-binding domains in the protein transcription factor IIIA from Xenopus oocytes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317541

22 September 2017

The 5S gene internal control region is composed of three distinct sequence elements, organized as two functional domains with variable spacing

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317541

22 September 2017

Three RFLPs recognized by an anonymous sequence localized to 21q11.2 [HGM8 D21S72]

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317541

22 September 2017

Xenopus transcription factor IIIA binds primarily at junctions between double helical stems and internal loops in oocyte 5S RNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317541

22 September 2017

Defining the binding site of Xenopus transcription factor IIIA on 5S RNA using truncated and chimeric 5S RNA molecules

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317541

22 September 2017

The importance of individual nucleotides for the structure and function of rRNA molecules in E. coli. A mutagenesis study

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317541

22 September 2017

Identification of the binding site on 5S rRNA for the transcription factor IIIA: proposed structure of a common binding site on 5S rRNA and on the gene

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317541

22 September 2017

A comparison of the solution structures and conformational properties of the somatic and oocyte 5S rRNAs ofXenopus laevis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317541

22 September 2017

Role of a bulged A residue in a specific RNA-protein interaction

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317541

22 September 2017

RNA binding site of R17 coat protein

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317541

22 September 2017

Zinc fingers: gilt by association

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317541

22 September 2017

Inhibition of restriction endonuclease Nci I cleavage by phosphorothioate groups and its application to oligonucleotide-directed mutagenesis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317541

22 September 2017

Functional domains of the Xenopus laevis 5S gene promoter

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317541

22 September 2017

The rapid generation of oligonucleotide-directed mutations at high frequency using phosphorothioate-modified DNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317541

22 September 2017

The use of phosphorothioate-modified DNA in restriction enzyme reactions to prepare nicked DNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317541

22 September 2017

Characterization of the RNA binding properties of transcription factor IIIA of Xenopus laevis oocytes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317541

22 September 2017

A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317541

22 September 2017

Isolation of a 7S particle from Xenopus laevis oocytes: a 5S RNA-protein complex

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317541

22 September 2017

A split binding site for TFIIIC on the Xenopus 5S gene

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317541

25 September 2017

Does unpaired adenosine-66 from helix II of Escherichia coli 5S RNA bind to protein L18?

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317541

25 September 2017

A control region in the center of the 5S RNA gene directs specific initiation of transcription: II. The 3' border of the region

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317541

15 June 2018

A control region in the center of the 5S RNA gene directs specific initiation of transcription: I. The 5' border of the region

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317541

15 June 2018

5S RNA structure and interaction with transcription factor A. 2. Ribonuclease probe of the 7S particle from Xenopus laevis immature oocytes and RNA exchange properties of the 7S particle

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317541

15 June 2018

5S RNA structure and interaction with transcription factor A. 1. Ribonuclease probe of the structure of 5S RNA from Xenopus laevis oocytes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317541

15 June 2018

Binding of Escherichia coli ribosomal protein S8 to 16 S rRNA. A model for the interaction and the tertiary structure of the RNA binding site.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317541

15 June 2018

The intragenic control region of the Xenopus 5 S RNA gene contains two factor A binding domains that must be aligned properly for efficient transcription initiation.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317541

15 June 2018

Characterization of RNA-protein interactions in 7 S ribonucleoprotein particles from Xenopus laevis oocytes.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317541

15 June 2018

The binding of a transcription factor to deletion mutants of a 5S ribosomal RNA gene

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317541

20 August 2018

Purification of Xenopus transcription factor IIIA and 5 S RNA from 7 S ribonucleoprotein particle by ammonium sulfate precipitation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317541

20 August 2018

Potential metal-binding domains in nucleic acid binding proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317541

20 August 2018

A quantitative assay for Xenopus 5S RNA gene transcription in vitro

1 reference

https://pubmed.ncbi.nlm.nih.gov/2494645

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Contact points between a positive transcription factor and the Xenopus 5S RNA gene

1 reference

https://pubmed.ncbi.nlm.nih.gov/2494645

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Isolation and characterization of a 7 S RNP particle from mature Xenopus laevis oocytes

1 reference

https://pubmed.ncbi.nlm.nih.gov/2494645

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The primary structure of transcription factor TFIIIA has 12 consecutive repeats

1 reference

https://pubmed.ncbi.nlm.nih.gov/2494645

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1093/NAR/17.5.2043

1 reference

Europe PubMed Central

PMC publication ID

20 September 2017

release_vkiijddoency7eze2j2vf6xa3m

1 reference

https://api.fatcat.wiki/v0/release/vkiijddoency7eze2j2vf6xa3m

24 November 2022

based on heuristic

mapped directly with Wikidata item

PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

20 September 2017

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

20 September 2017

ResearchGate publication ID

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