(Q40525780)

21 September 2017

Parallel-stranded DNA under topological stress: rearrangement of (dA)15.(dT)15 to a d(A.A.T)n triplex (English)

1 reference

21 September 2017

2

1 reference

21 September 2017

Klysik J

1

1 reference

PMCID

332546

21 September 2017

Jovin TM

series ordinal

3

1 reference

21 September 2017

1 December 1991

1 reference

21 September 2017

Nucleic Acids Research

1 reference

21 September 2017

19

1 reference

21 September 2017

25

1 reference

21 September 2017

7145-7154

1 reference

Energetics of B-to-Z transition in DNA.

21 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=332546

57 Sequencing end-labeled DNA with base-specific chemical cleavages

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=332546

Diethyl pyrocarbonate: a chemical probe for secondary structure in negatively supercoiled DNA.

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=332546

Formation of the triple-stranded polynucleotide helix, poly(A.A.U)

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=332546

Competitive behavior of multiple, discrete B-Z transitions in supercoiled DNA.

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=332546

Structural interconversion of alternating purine-pyrimidine inverted repeats cloned in supercoiled plasmids.

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=332546

22 September 2017

Parallel stranded DNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=332546

Parallel stranded duplex DNA.

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=332546

Magnesium ion-dependent triple-helix structure formed by homopurine-homopyrimidine sequences in supercoiled plasmid DNA.

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=332546

Highly selective chemical modification of cruciform loops by diethyl pyrocarbonate

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=332546

Characterization of a parallel-stranded DNA hairpin

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=332546

Energetics of the B-H transition in supercoiled DNA carrying d(CT)x.d(AG)x and d(C)n.d(G)n inserts

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=332546

Relative stability of parallel- and antiparallel-stranded duplex DNA.

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=332546

DNA-sequence and metal-ion specificity of the formation of *H-DNA

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=332546

Formation of a stable triplex from a single DNA strand

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=332546

Long (dA)n.(dT)n tracts can form intramolecular triplexes under superhelical stress

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=332546

Photofootprinting of DNA triplexes

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=332546

Second structural motif for recognition of DNA by oligonucleotide-directed triple-helix formation

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=332546

Local supercoil-stabilized DNA structures

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=332546

Paranemic structures of DNA and their role in DNA unwinding

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=332546

Structural polymorphism of homopurine--homopyrimidine sequences: the secondary DNA structure adopted by a d(GA.CT)22 sequence in the presence of zinc ions.

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=332546

The supercoil-stabilised cruciform of ColE1 is hyper-reactive to osmium tetroxide

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=332546

Chemical probes of DNA conformation: detection of Z-DNA at nucleotide resolution.

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=332546

Can the double helix be parallel?

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=332546

Structures of homopurine-homopyrimidine tract in superhelical DNA.

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=332546

Site-specific OsO4 modification of the B-Z junctions formed at the (dA-dC)32 region in supercoiled DNA.

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=332546

A theoretical study of formation of DNA noncanonical structures under negative superhelical stress.

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=332546

Intramolecular DNA triplexes in supercoiled plasmids. I. Effect of loop size on formation and stability

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=332546

Electrostatic forces at helix-coil boundaries in DNA.

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=332546

Structure, stability, and thermodynamics of a short intermolecular purine-purine-pyrimidine triple helix

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=332546

Helix formation by d(TA) oligomers. II. Analysis of the helix-coli transitions of linear and circular oligomers

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=332546

The hydrogen-bonding structure in parallel-stranded duplex DNA is reverse Watson-Crick

20 August 2018

1 reference

12 December 2020

Reactivity of parallel-stranded DNA to chemical modification reagents

1 reference

12 December 2020

Influence of DNA sequence on the formation of non-B right-handed helices in oligopurine.oligopyrimidine inserts in plasmids

1 reference

12 December 2020

Chemical probing of the homopurine.homopyrimidine tract in supercoiled DNA at single-nucleotide resolution

1 reference

12 December 2020

The S1-sensitive form of d(C-T)n.d(A-G)n: chemical evidence for a three-stranded structure in plasmids

1 reference

12 December 2020

Substrate properties of 25-nt parallel-stranded linear DNA duplexes

1 reference

12 December 2020

Spectroscopic properties and helical stabilities of 25-nt parallel-stranded linear DNA duplexes

1 reference

12 December 2020

Electron microscopy of supercoiled pEJ4 DNA containing homopurine.homopyrimidine sequences

1 reference

12 December 2020

Fluorescence energy transfer shows that the four-way DNA junction is a right-handed cross of antiparallel molecules

1 reference

12 December 2020

Structure of (dG)n.(dC)n under superhelical stress and acid pH

1 reference

12 December 2020

The energetics of the B-Z transition in DNA

1 reference

12 December 2020

Specificity in formation of triple-stranded nucleic acid helical complexes: studies with agarose-linked polyribonucleotide affinity columns

1 reference

12 December 2020

Single strands, triple strands, and kinks in H-DNA

1 reference

12 December 2020

Chemical probing of homopurine-homopyrimidine mirror repeats in supercoiled DNA

1 reference

12 December 2020

Effect of base composition at the center of inverted repeated DNA sequences on cruciform transitions in DNA

1 reference

12 December 2020

Thermodynamics of the ColE1 cruciform. Comparisons between probing and topological experiments using single topoisomers

1 reference

12 December 2020

1 reference

12 December 2020

Chemical reactivity of potassium permanganate and diethyl pyrocarbonate with B DNA: specific reactivity with short A-tracts

1 reference

12 December 2020

A parallel stranded linear DNA duplex incorporating dG.dC base pairs

1 reference

12 December 2020

Torsional rigidity of DNA and length dependence of the free energy of DNA supercoiling

1 reference

12 December 2020

The facile generation of covalently closed, circular DNAs with defined negative superhelical densities

1 reference

12 December 2020

Evidence of cruciform structures in superhelical DNA provided by two‐dimensional gel electrophoresis

1 reference

12 December 2020

Cruciform formation in a negatively supercoiled DNA may be kinetically forbidden under physiological conditions

1 reference

12 December 2020

The crystal structure of deoxyadenosine monohydrate

1 reference

12 December 2020

Identifiers

DOI

10.1093/NAR/19.25.7145

1 reference

21 September 2017

1 reference

21 September 2017

1 reference

PMCID

332546