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Hfq is a regulator of F-plasmid TraJ and TraM synthesis in Escherichia coli.
scientific article published on January 2006
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Europe PubMed Central
PMC publication ID
1317594
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16352828%20AND%20SRC:MED&resulttype=core&format=json
retrieved
10 January 2020
title
Hfq is a regulator of F-plasmid TraJ and TraM synthesis in Escherichia coli
(English)
1 reference
stated in
Europe PubMed Central
PMC publication ID
1317594
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16352828%20AND%20SRC:MED&resulttype=core&format=json
retrieved
10 January 2020
main subject
Escherichia coli
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author
Laura Frost
series ordinal
2
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Europe PubMed Central
PMC publication ID
1317594
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16352828%20AND%20SRC:MED&resulttype=core&format=json
retrieved
10 January 2020
author name string
William R Will
series ordinal
1
1 reference
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Europe PubMed Central
PMC publication ID
1317594
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16352828%20AND%20SRC:MED&resulttype=core&format=json
retrieved
10 January 2020
publication date
1 January 2006
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Europe PubMed Central
PMC publication ID
1317594
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16352828%20AND%20SRC:MED&resulttype=core&format=json
retrieved
10 January 2020
published in
Journal of Bacteriology
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Europe PubMed Central
PMC publication ID
1317594
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16352828%20AND%20SRC:MED&resulttype=core&format=json
retrieved
10 January 2020
volume
188
1 reference
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Europe PubMed Central
PMC publication ID
1317594
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16352828%20AND%20SRC:MED&resulttype=core&format=json
retrieved
10 January 2020
issue
1
1 reference
stated in
Europe PubMed Central
PMC publication ID
1317594
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16352828%20AND%20SRC:MED&resulttype=core&format=json
retrieved
10 January 2020
page(s)
124-131
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Europe PubMed Central
PMC publication ID
1317594
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16352828%20AND%20SRC:MED&resulttype=core&format=json
retrieved
10 January 2020
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11 June 2022
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cites work
Mutations in the C-terminal region of TraM provide evidence for in vivo TraM-TraD interactions during F-plasmid conjugation.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1317594
retrieved
25 September 2017
AU-rich sequences within 5' untranslated leaders enhance translation and stabilize mRNA in Escherichia coli.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1317594
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25 September 2017
The small RNA regulators of Escherichia coli: roles and mechanisms*
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1317594
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25 September 2017
The protease Lon and the RNA-binding protein Hfq reduce silencing of the Escherichia coli bgl operon by H-NS.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1317594
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25 September 2017
The bacterial Sm-like protein Hfq: a key player in RNA transactions
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1317594
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25 September 2017
Hfq, a new chaperoning role: binding to messenger RNA determines access for small RNA regulator
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1317594
retrieved
25 September 2017
The poly(A) binding protein Hfq protects RNA from RNase E and exoribonucleolytic degradation
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1317594
retrieved
25 September 2017
FinO is an RNA chaperone that facilitates sense-antisense RNA interactions
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1317594
retrieved
25 September 2017
Coincident Hfq binding and RNase E cleavage sites on mRNA and small regulatory RNAs
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1317594
retrieved
25 September 2017
Coupled degradation of a small regulatory RNA and its mRNA targets in Escherichia coli
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1317594
retrieved
25 September 2017
Hfq: a bacterial Sm-like protein that mediates RNA-RNA interaction
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1317594
retrieved
25 September 2017
The Sm-like Hfq protein increases OxyS RNA interaction with target mRNAs
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1317594
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25 September 2017
Hfq is necessary for regulation by the untranslated RNA DsrA
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1317594
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25 September 2017
Hfq (HF1) stimulates ompA mRNA decay by interfering with ribosome binding
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1317594
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25 September 2017
Growth phase-dependent variation in protein composition of the Escherichia coli nucleoid
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1317594
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25 September 2017
Degradation of FinP antisense RNA from F-like plasmids: the RNA-binding protein, FinO, protects FinP from ribonuclease E
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1317594
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25 September 2017
Host factor I, Hfq, binds to Escherichia coli ompA mRNA in a growth rate-dependent fashion and regulates its stability.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1317594
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25 September 2017
Riboregulation in Escherichia coli: DsrA RNA acts by RNA:RNA interactions at multiple loci
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PubMed Central
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25 September 2017
Negative regulation of mutS and mutH repair gene expression by the Hfq and RpoS global regulators of Escherichia coli K-12.
1 reference
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PubMed Central
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25 September 2017
The cytoplasmic DNA-binding protein TraM binds to the inner membrane protein TraD in vitro
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1317594
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25 September 2017
Regulation of the expression of the traM gene of the F sex factor of Escherichia coli.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1317594
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25 September 2017
The RNA-binding protein HF-I, known as a host factor for phage Qbeta RNA replication, is essential for rpoS translation in Escherichia coli
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1317594
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25 September 2017
Characterization of broadly pleiotropic phenotypes caused by an hfq insertion mutation in Escherichia coli K-12.
1 reference
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PubMed Central
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25 September 2017
Analysis of the sequence and gene products of the transfer region of the F sex factor
1 reference
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1317594
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25 September 2017
A small RNA acts as an antisilencer of the H-NS-silenced rcsA gene of Escherichia coli
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1317594
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25 September 2017
Beginning a Genetic Analysis of Conjugational Transfer Determined by the F Factor inEscherichia coliby Isolation and Characterization of Transfer-Deficient Mutants
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1317594
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25 September 2017
Transposition and fusion of the lac genes to selected promoters in Escherichia coli using bacteriophage lambda and Mu
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1317594
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25 September 2017
Back to log phase: sigma S as a global regulator in the osmotic control of gene expression in Escherichia coli
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1317594
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25 September 2017
Characterization of the opposing roles of H-NS and TraJ in transcriptional regulation of the F-plasmid tra operon
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1317594
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17 June 2018
The FinOP repressor system of plasmid R1: analysis of the antisense RNA control of traJ expression and conjugative DNA transfer.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1317594
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17 June 2018
Structural and functional analyses of the FinP antisense RNA regulatory system of the F conjugative plasmid.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1317594
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17 June 2018
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PubMed Central
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stated in
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1 reference
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PubMed Central
reference URL
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1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1317594
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19 August 2018
The FinO protein of IncF plasmids binds FinP antisense RNA and its target, traJ mRNA, and promotes duplex formation.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1317594
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19 August 2018
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1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/16352828
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based on heuristic
inferred from PubMed ID database lookup
The F plasmid carries an IS3 insertion within finO
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/16352828
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
FinOP repression of the F plasmid involves extension of the half-life of FinP antisense RNA by FinO
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/16352828
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Identifiers
DOI
10.1128/JB.188.1.124-131.2006
1 reference
stated in
Europe PubMed Central
PMC publication ID
1317594
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16352828%20AND%20SRC:MED&resulttype=core&format=json
retrieved
10 January 2020
PMC publication ID
1317594
1 reference
stated in
Europe PubMed Central
PMC publication ID
1317594
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16352828%20AND%20SRC:MED&resulttype=core&format=json
retrieved
10 January 2020
PubMed publication ID
16352828
1 reference
stated in
Europe PubMed Central
PMC publication ID
1317594
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16352828%20AND%20SRC:MED&resulttype=core&format=json
retrieved
10 January 2020
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