(Q40775428)

English

Boltzmann's principle, knowledge-based mean fields and protein folding. An approach to the computational determination of protein structures

scientific article

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scholarly article

1 reference

Europe PubMed Central

23 September 2017

1 reference

Europe PubMed Central

Boltzmann's principle, knowledge-based mean fields and protein folding. An approach to the computational determination of protein structures (English)

1 reference

Europe PubMed Central

23 September 2017

protein folding

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protein structure

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computational biology

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based on heuristic

inferred from title

author name string

M J Sippl

1

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Europe PubMed Central

23 September 2017

publication date

1 August 1993

1 reference

Europe PubMed Central

23 September 2017

Journal of Computer - Aided Molecular Design

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Europe PubMed Central

23 September 2017

7

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Europe PubMed Central

23 September 2017

473-501

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Europe PubMed Central

23 September 2017

4

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Europe PubMed Central

23 September 2017

https://scigraph.springernature.com/pub.10.1007/bf02337562

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On the use of sequence homologies to predict protein structure: identical pentapeptides can have completely different conformations

1 reference

https://pubmed.ncbi.nlm.nih.gov/8229096

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Molecular dynamics simulations in biology

1 reference

https://pubmed.ncbi.nlm.nih.gov/8229096

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Computer simulation of the dynamics of hydrated protein crystals and its comparison with x-ray data

1 reference

https://pubmed.ncbi.nlm.nih.gov/8229096

12 December 2020

based on heuristic

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It's déjà vu all over again

1 reference

https://pubmed.ncbi.nlm.nih.gov/8229096

12 December 2020

based on heuristic

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Contact potential that recognizes the correct folding of globular proteins

1 reference

https://pubmed.ncbi.nlm.nih.gov/8229096

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Prediction of protein backbone conformation based on seven structure assignments. Influence of local interactions

1 reference

https://pubmed.ncbi.nlm.nih.gov/8229096

12 December 2020

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Assembly of polypeptide and protein backbone conformations from low energy ensembles of short fragments: Development of strategies and construction of models for myoglobin, lysozyme, and thymosin β4

1 reference

https://pubmed.ncbi.nlm.nih.gov/8229096

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

On the problem of comparing protein structures. Development and applications of a new method for the assessment of structural similarities of polypeptide conformations

1 reference

https://pubmed.ncbi.nlm.nih.gov/8229096

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Detection of native-like models for amino acid sequences of unknown three-dimensional structure in a data base of known protein conformations

1 reference

https://pubmed.ncbi.nlm.nih.gov/8229096

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Structure-derived hydrophobic potential. Hydrophobic potential derived from X-ray structures of globular proteins is able to identify native folds

1 reference

https://pubmed.ncbi.nlm.nih.gov/8229096

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Assessment of protein models with three-dimensional profiles

1 reference

https://pubmed.ncbi.nlm.nih.gov/8229096

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A computer model to dynamically simulate protein folding: studies with crambin.

1 reference

https://pubmed.ncbi.nlm.nih.gov/8229096

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Errors in three dimensions

1 reference

https://pubmed.ncbi.nlm.nih.gov/8229096

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identification of protein folds: matching hydrophobicity patterns of sequence sets with solvent accessibility patterns of known structures

1 reference

https://pubmed.ncbi.nlm.nih.gov/8229096

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Evaluation of protein models by atomic solvation preference.

1 reference

https://pubmed.ncbi.nlm.nih.gov/8229096

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Extracting information on folding from the amino acid sequence: accurate predictions for protein regions with preferred conformation in the absence of tertiary interactions

1 reference

https://pubmed.ncbi.nlm.nih.gov/8229096

12 December 2020

based on heuristic

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Principles that govern the folding of protein chains

1 reference

https://pubmed.ncbi.nlm.nih.gov/8229096

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Database of homology-derived protein structures and the structural meaning of sequence alignment

1 reference

https://pubmed.ncbi.nlm.nih.gov/8229096

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The Protein Data Bank: a computer-based archival file for macromolecular structures

1 reference

https://pubmed.ncbi.nlm.nih.gov/8229096

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Three-dimensional structure of proteins determined by molecular dynamics with interproton distance restraints: application to crambin

1 reference

https://pubmed.ncbi.nlm.nih.gov/8229096

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A new approach to protein fold recognition

1 reference

https://pubmed.ncbi.nlm.nih.gov/8229096

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Dynamics of proteins: elements and function

1 reference

https://pubmed.ncbi.nlm.nih.gov/8229096

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Folding and association of proteins

1 reference

https://pubmed.ncbi.nlm.nih.gov/8229096

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Folding of immunogenic peptide fragments of proteins in water solution. I. Sequence requirements for the formation of a reverse turn

1 reference

https://pubmed.ncbi.nlm.nih.gov/8229096

12 December 2020

based on heuristic

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The role of computer simulation techniques in protein engineering

1 reference

https://pubmed.ncbi.nlm.nih.gov/8229096

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identification of native protein folds amongst a large number of incorrect models. The calculation of low energy conformations from potentials of mean force

1 reference

https://pubmed.ncbi.nlm.nih.gov/8229096

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A Method to Identify Protein Sequences That Fold into a Known Three-Dimensional Structure

1 reference

https://pubmed.ncbi.nlm.nih.gov/8229096

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A general method applicable to the search for similarities in the amino acid sequence of two proteins

1 reference

https://pubmed.ncbi.nlm.nih.gov/8229096

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

An analysis of incorrectly folded protein models. Implications for structure predictions.

1 reference

https://pubmed.ncbi.nlm.nih.gov/8229096

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Mandelate racemase and muconate lactonizing enzyme are mechanistically distinct and structurally homologous

1 reference

https://pubmed.ncbi.nlm.nih.gov/8229096

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identification of predictive sequence motifs limited by protein structure data base size

1 reference

https://pubmed.ncbi.nlm.nih.gov/8229096

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Folding of immunogenic peptide fragments of proteins in water solution. II. The nascent helix

1 reference

https://pubmed.ncbi.nlm.nih.gov/8229096

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Determination of the three-dimensional structure of the Antennapedia homeodomain from Drosophila in solution by 1H nuclear magnetic resonance spectroscopy

1 reference

https://pubmed.ncbi.nlm.nih.gov/8229096

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identification of common molecular subsequences

1 reference

https://pubmed.ncbi.nlm.nih.gov/8229096

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Calculation of conformational ensembles from potentials of mean force. An approach to the knowledge-based prediction of local structures in globular proteins.

1 reference

https://pubmed.ncbi.nlm.nih.gov/8229096

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1007/BF02337562

1 reference

Europe PubMed Central

23 September 2017

DBLP publication ID

journals/jcamd/Sippl93

1 reference

DBLP Dataset 2021-01-02

28 January 2021

Dimensions Publication ID

0 references

1 reference

Europe PubMed Central

23 September 2017

ResearchGate publication ID

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