(Q40792617)

English

Roles of RNase E, RNase II and PNPase in the degradation of the rpsO transcripts of Escherichia coli: stabilizing function of RNase II and evidence for efficient degradation in an ams pnp rnb mutant.

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scholarly article

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Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:7519147%20AND%20SRC:MED&resulttype=core&format=json

20 October 2019

Roles of RNase E, RNase II and PNPase in the degradation of the rpsO transcripts of Escherichia coli: stabilizing function of RNase II and evidence for efficient degradation in an ams pnp rnb mutant (English)

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:7519147%20AND%20SRC:MED&resulttype=core&format=json

20 October 2019

Escherichia coli

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Eliane Hajnsdorf

1

1 reference

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PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:7519147%20AND%20SRC:MED&resulttype=core&format=json

20 October 2019

4

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:7519147%20AND%20SRC:MED&resulttype=core&format=json

20 October 2019

author name string

Steier O

2

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20 October 2019

Coscoy L

3

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:7519147%20AND%20SRC:MED&resulttype=core&format=json

20 October 2019

Régnier P

5

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20 October 2019

language of work or name

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publication date

1 July 1994

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20 October 2019

The EMBO Journal

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:7519147%20AND%20SRC:MED&resulttype=core&format=json

20 October 2019

13

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20 October 2019

14

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20 October 2019

3368-3377

1 reference

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PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:7519147%20AND%20SRC:MED&resulttype=core&format=json

20 October 2019

Genetic regulatory mechanisms in the synthesis of proteins

2 references

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24 September 2017

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19 August 2018

Unstable ribonucleic acid revealed by pulse labelling of Escherichia coli

1 reference

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24 September 2017

RNase E activity is conferred by a single polypeptide: overexpression, purification, and properties of the ams/rne/hmp1 gene product

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=395234

24 September 2017

Promiscuous exoribonucleases of Escherichia coli

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=395234

24 September 2017

The Escherichia coli pcnB gene promotes adenylylation of antisense RNAI of ColE1-type plasmids in vivo and degradation of RNAI decay intermediates

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=395234

24 September 2017

PcnB is required for the rapid degradation of RNAI, the antisense RNA that controls the copy number of CoIE1‐related plasmids

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=395234

24 September 2017

The genetics and regulation of heat-shock proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=395234

24 September 2017

Expression of the rpsO and pnp genes: structural analysis of a DNA fragment carrying their control regions

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=395234

24 September 2017

Posttranscriptional control of bacteriophage lambda gene expression from a site distal to the gene

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=395234

24 September 2017

Attenuation and processing of RNA from the rplJL--rpoBC transcription unit of Escherichia coli

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=395234

24 September 2017

Characterization of Polynucleotide Phosphorylase Mutants ofEscherichia coli

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=395234

24 September 2017

The first step in the functional inactivation of the Escherichia coli polynucleotide phosphorylase messenger is a ribonuclease III processing at the 5' end.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=395234

24 September 2017

Mechanisms of mRNA decay in bacteria: a perspective

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=395234

24 September 2017

Processing of unstable bacteriophage T4 gene 32 mRNAs into a stable species requires Escherichia coli ribonuclease E.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=395234

24 September 2017

Effect of NusA protein on expression of the nusA,infB operon in E. coli

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=395234

24 September 2017

Retroregulation of bacteriophage lambda int gene expression.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=395234

24 September 2017

RNase III stimulates the translation of the cIII gene of bacteriophage lambda

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=395234

24 September 2017

Autoregulation of RNase III operon by mRNA processing

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=395234

24 September 2017

The metabolic role of RNases

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=395234

24 September 2017

Stabilization of discrete mRNA breakdown products in ams pnp rnb multiple mutants of Escherichia coli K-12

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=395234

24 September 2017

Stabilization of translationally active mRNA by prokaryotic REP sequences

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=395234

24 September 2017

Nucleolytic processing of ribonucleic acid transcripts in procaryotes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=395234

24 September 2017

Polynucleotide phosphorylase and ribonuclease II are required for cell viability and mRNA turnover in Escherichia coli K-12.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=395234

24 September 2017

Sequence and transcriptional pattern of the essential Escherichia coli secE-nusG operon

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=395234

24 September 2017

RNase I*, a form of RNase I, and mRNA degradation in Escherichia coli

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=395234

24 September 2017

The Ams (altered mRNA stability) protein and ribonuclease E are encoded by the same structural gene of Escherichia coli

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=395234

24 September 2017

Specificity of Escherichia coli endoribonuclease RNase E: in vivo and in vitro analysis of mutants in a bacteriophage T4 mRNA processing site.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=395234

24 September 2017

The ompA 5' untranslated RNA segment functions in Escherichia coli as a growth-rate-regulated mRNA stabilizer whose activity is unrelated to translational efficiency

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=395234

24 September 2017

Escherichia coli cell division inhibitor DicF-RNA of the dicB operon. Evidence for its generation in vivo by transcription termination and by RNase III and RNase E-dependent processing

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=395234

24 September 2017

D-E-A-D protein family of putative RNA helicases

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=395234

24 September 2017

mRNA degradation in procaryotes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=395234

24 September 2017

Poly(A) RNA in Escherichia coli: nucleotide sequence at the junction of the lpp transcript and the polyadenylate moiety

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=395234

24 September 2017

Broad-specificity endoribonucleases and mRNA degradation in Escherichia coli

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=395234

24 September 2017

Gene affecting longevity of messenger RNA: A mutant ofEscherichia coli with altered mRNA stability

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=395234

24 September 2017

Exoribonucleases in wild type Escherichia coli and RNase II-deficient mutants

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=395234

24 September 2017

Purification and some novel properties of Escherichia coli RNase II

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=395234

24 September 2017

A conditional lethal mutation in an Escherichia coli strain with a longer chemical lifetime of messenger RNA

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=395234

24 September 2017

Functional mRNA half lives in E. coli

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=395234

25 September 2017

Cleavages in the 5' region of the ompA and bla mRNA control stability: studies with an E. coli mutant altering mRNA stability and a novel endoribonuclease

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=395234

25 September 2017

Maturation of Escherichia coli tryptophan operon mRNA: evidence for 3' exonucleolytic processing after rho-dependent termination

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=395234

25 September 2017

Removal of a terminator structure by RNA processing regulates int gene expression

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=395234

17 June 2018

Degradation of RNA in Escherichia coli. A hypothesis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=395234

17 June 2018

Coliphage lambda to terminator lowers the stability of messenger RNA in Escherichia coli hosts.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=395234

17 June 2018

RNA processing by RNase III is involved in the synthesis of Escherichia coli polynucleotide phosphorylase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=395234

17 June 2018

Cleavage by RNase III in the transcripts of the met Y-nus-A-infB operon of Escherichia coli releases the tRNA and initiates the decay of the downstream mRNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=395234

17 June 2018

Nucleotide sequence of the pnp gene of Escherichia coli encoding polynucleotide phosphorylase. Homology of the primary structure of the protein with the RNA-binding domain of ribosomal protein S1.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=395234

17 June 2018

Escherichia coli RNase E has a role in the decay of bacteriophage T4 mRNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=395234

17 June 2018

Genetic studies of cleavage-initiated mRNA decay and processing of ribosomal 9S RNA show that the Escherichia coli ams and rne loci are the same

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=395234

17 June 2018

RNase PH catalyzes a synthetic reaction, the addition of nucleotides to the 3′ end of RNA

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=395234

17 June 2018

Control of RNase E-mediated RNA degradation by 5'-terminal base pairing in E. coli

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=395234

17 June 2018

Purification and characterization of ribonuclease M and mRNA degradation in Escherichia coli.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=395234

19 August 2018

An intercistronic stem-loop structure functions as an mRNA decay terminator necessary but insufficient for puf mRNA stability

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=395234

19 August 2018

Determinants of messenger RNA stability

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=395234

19 August 2018

mRNA degradation by processive 3'-5' exoribonucleases in vitro and the implications for prokaryotic mRNA decay in vivo

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=395234

19 August 2018

Escherichia coli endoribonuclease RNase E: autoregulation of expression and site-specific cleavage of mRNA

1 reference

https://pubmed.ncbi.nlm.nih.gov/7519147

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Nucleolytic inactivation and degradation of the RNase III processed pnp message encoding polynucleotide phosphorylase of Escherichia coli

1 reference

https://pubmed.ncbi.nlm.nih.gov/7519147

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Growth-rate dependent regulation of mRNA stability in Escherichia coli

1 reference

https://pubmed.ncbi.nlm.nih.gov/7519147

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Initiation, attenuation and RNase III processing of transcripts from the Escherichia coli operon encoding ribosomal protein S15 and polynucleotide phosphorylase

1 reference

https://pubmed.ncbi.nlm.nih.gov/7519147

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Specific endonucleolytic cleavage sites for decay of Escherichia coli mRNA

1 reference

https://pubmed.ncbi.nlm.nih.gov/7519147

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

3′-terminal polyadenylate sequences of Escherichia coli tryptophan synthetase α-subunit messenger RNA

1 reference

https://pubmed.ncbi.nlm.nih.gov/7519147

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

OOP RNA, produced from multicopy plasmids, inhibits lambda cII gene expression through an RNase III-dependent mechanism

1 reference

https://pubmed.ncbi.nlm.nih.gov/7519147

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Escherichia coli g1yA mRNA decay: The role of 3′ secondary structure and the effects of the pnp and rnb mutations

1 reference

https://pubmed.ncbi.nlm.nih.gov/7519147

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Decay of mRNA encoding ribosomal protein S15 of Escherichia coli is initiated by an RNase E-dependent endonucleolytic cleavage that removes the 3' stabilizing stem and loop structure

1 reference

https://pubmed.ncbi.nlm.nih.gov/7519147

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Different specificities of ribonuclease II and polynucleotide phosphorylase in 3'mRNA decay

1 reference

https://pubmed.ncbi.nlm.nih.gov/7519147

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Organization of the Escherichia coli chromosome around the genes for translation initiation factor IF2 (infB) and a transcription termination factor (nusA)

1 reference

https://pubmed.ncbi.nlm.nih.gov/7519147

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

RNase III cleavages in non-coding leaders of Escherichia coli transcripts control mRNA stability and genetic expression

1 reference

https://pubmed.ncbi.nlm.nih.gov/7519147

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The synthesis of some proteins is affected in RNA processing mutants of Escherichia coli

1 reference

https://pubmed.ncbi.nlm.nih.gov/7519147

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The gene specifying RNase E (rne) and a gene affecting mRNA stability (ams) are the same gene

1 reference

https://pubmed.ncbi.nlm.nih.gov/7519147

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A 5'-terminal stem-loop structure can stabilize mRNA in Escherichia coli

1 reference

https://pubmed.ncbi.nlm.nih.gov/7519147

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Processing of mRNA by ribonuclease III regulates expression of gene 1.2 of bacteriophage T7

1 reference

https://pubmed.ncbi.nlm.nih.gov/7519147

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1002/J.1460-2075.1994.TB06639.X

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:7519147%20AND%20SRC:MED&resulttype=core&format=json

20 October 2019

PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:7519147%20AND%20SRC:MED&resulttype=core&format=json

20 October 2019

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:7519147%20AND%20SRC:MED&resulttype=core&format=json

20 October 2019

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