(Q40806483)

23 September 2017

Sequence-dependent bending propensity of DNA as revealed by DNase I: parameters for trinucleotides (English)

1 reference

23 September 2017

Brukner I

1

1 reference

23 September 2017

Sánchez R

series ordinal

2

1 reference

23 September 2017

Suck D

series ordinal

3

1 reference

23 September 2017

Pongor S

series ordinal

4

1 reference

23 September 2017

language of work or name

English

0 references

publication date

1 April 1995

1 reference

23 September 2017

1 reference

23 September 2017

14

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23 September 2017

8

1 reference

23 September 2017

1812-1818

1 reference

The crystal structure of EcoRV endonuclease and of its complexes with cognate and non-cognate DNA fragments

23 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=398274

Evidence for opposite groove-directed curvature of GGGCCC and AAAAA sequence elements

24 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=398274

Crystallographic analysis of C-C-A-A-G-C-T-T-G-G and its implications for bending in B-DNA

24 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=398274

The phage 434 OR2/R1-69 complex at 2.5 A resolution

24 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=398274

DNA recognition by beta-sheets in the Arc repressor-operator crystal structure

24 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=398274

CRP fixes the rotational orientation of covalently closed DNA molecules

24 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=398274

DNA recognition by DNase I.

24 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=398274

1.9 A resolution refined structure of TBP recognizing the minor groove of TATAAAAG

24 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=398274

57 Sequencing end-labeled DNA with base-specific chemical cleavages

24 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=398274

Temperature and salt dependence of the gel migration anomaly of curved DNA fragments

24 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=398274

Structure of the DNA-Eco RI endonuclease recognition complex at 3 A resolution

24 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=398274

DNA flexibility variation may dominate DNase I cleavage

24 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=398274

Sequence-dependent structural variations of DNA revealed by DNase I.

24 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=398274

Protein-DNA conformational changes in the crystal structure of a lambda Cro-operator complex

24 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=398274

Curved DNA without A-A: experimental estimation of all 16 DNA wedge angles

24 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=398274

DNase I-induced DNA conformation. 2 A structure of a DNase I-octamer complex

24 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=398274

Crystal structure of a CAP-DNA complex: the DNA is bent by 90 degrees

24 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=398274

X-ray structure of the DNase I-d(GGTATACC)2 complex at 2.3 A resolution

24 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=398274

Determinants of repressor/operator recognition from the structure of the trp operator binding site.

24 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=398274

Sequence-dependent variation in the conformation of DNA

15 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=398274

Cooperative binding of lambda repressors to sites separated by integral turns of the DNA helix

15 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=398274

DNA bending and its relation to nucleosome positioning.

15 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=398274

Sequence periodicities in chicken nucleosome core DNA.

15 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=398274

Principles of sequence-dependent flexure of DNA.

15 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=398274

The intrinsic curvature of DNA in solution.

15 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=398274

DNA sequence determinants of CAP-induced bending and protein binding affinity.

15 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=398274

Structure of a B-DNA decamer with a central T-A step: C-G-A-T-T-A-A-T-C-G

15 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=398274

Conformational sub-states in B-DNA.

15 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=398274

Physiological concentration of magnesium ions induces a strong macroscopic curvature in GGGCCC-containing DNA

15 June 2018

1 reference

12 December 2020

DNA structural variations in the E. coli tyrT promoter

1 reference

12 December 2020

DNA bend direction by phase sensitive detection

1 reference

12 December 2020

[The effect of temperature and ionic strength on the electrophoretic motility of synthetic DNA fragments]

1 reference

12 December 2020

CAP binding sites reveal pyrimidine-purine pattern characteristic of DNA bending

1 reference

12 December 2020

Validity of the nearest-neighbor approximation in the evaluation of the electrophoretic manifestations of DNA curvature

1 reference

12 December 2020

Sequence-dependent DNA structure. The role of base stacking interactions

1 reference

12 December 2020

Characterization of preferred deoxyribonuclease I cleavage sites

1 reference

12 December 2020

Identifiers

1 reference

23 September 2017

PubMed publication ID

7737131

1 reference