(Q40954559)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:8575884%20AND%20SRC:MED&resulttype=core&format=json

14 October 2019

review article

1 reference

title

Scaffold/matrix-attached regions: structural properties creating transcriptionally active loci (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:8575884%20AND%20SRC:MED&resulttype=core&format=json

14 October 2019

author name string

J Bode

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:8575884%20AND%20SRC:MED&resulttype=core&format=json

14 October 2019

T Schlake

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:8575884%20AND%20SRC:MED&resulttype=core&format=json

14 October 2019

M Ríos-Ramírez

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:8575884%20AND%20SRC:MED&resulttype=core&format=json

14 October 2019

C Mielke

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:8575884%20AND%20SRC:MED&resulttype=core&format=json

14 October 2019

M Stengert

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:8575884%20AND%20SRC:MED&resulttype=core&format=json

14 October 2019

V Kay

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:8575884%20AND%20SRC:MED&resulttype=core&format=json

14 October 2019

D Klehr-Wirth

7

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:8575884%20AND%20SRC:MED&resulttype=core&format=json

14 October 2019

publication date

1 January 1995

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:8575884%20AND%20SRC:MED&resulttype=core&format=json

International Review of Cytology

14 October 2019

published in

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:8575884%20AND%20SRC:MED&resulttype=core&format=json

14 October 2019

volume

162A

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:8575884%20AND%20SRC:MED&resulttype=core&format=json

14 October 2019

page(s)

389-454

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:8575884%20AND%20SRC:MED&resulttype=core&format=json

DNase I sensitive domain of the gene coding for the glycolytic enzyme glyceraldehyde-3-phosphate dehydrogenase

14 October 2019

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Characterization of a plant scaffold attachment region in a DNA fragment that normalizes transgene expression in tobacco

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Avian nuclear matrix proteins bind very tightly to cellular DNA of the beta-globin gene enhancer in a tissue-specific fashion

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7 January 2021

Sodium butyrate inhibits histone deacetylation in cultured cells

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7 January 2021

Regulation of the function of eukaryotic DNA topoisomerase I: analysis of the binding step and of the catalytic constants of topoisomerization as a function of DNA topology

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7 January 2021

A 5' element of the chicken beta-globin domain serves as an insulator in human erythroid cells and protects against position effect in Drosophila

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7 January 2021

Chromosomal loop anchorage of the kappa immunoglobulin gene occurs next to the enhancer in a region containing topoisomerase II sites

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7 January 2021

Effects of sodium butyrate and 5-azacytidine on DNA methylation in human tumor cell lines: Variable response to drug treatment and withdrawal

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7 January 2021

The mechanism of conservative site-specific recombination

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7 January 2021

Hotspots and warm spots: integration specificity of retroelements

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7 January 2021

The presence of sequence-specific protein binding sites correlate with replication activity and matrix binding in a 1.7 Kb-long DNA fragment of the chicken alpha-globin gene domain

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7 January 2021

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7 January 2021

A tissue-specific MAR/SAR DNA-binding protein with unusual binding site recognition

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7 January 2021

A plant scaffold attached region detected close to a T-DNA integration site is active in mammalian cells

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7 January 2021

Transcriptional regulation of multigene loci: multilevel control

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7 January 2021

Bovine papillomavirus vector that propagates as a plasmid in both mouse and bacterial cells

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7 January 2021

Expansions of transgene repeats cause heterochromatin formation and gene silencing in Drosophila.

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7 January 2021

Mechanisms of transcriptional synergism between distinct virus-inducible enhancer elements

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7 January 2021

Sequence-specific DNA-binding proteins are components of a nuclear matrix-attachment site

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7 January 2021

Modularity in promoters and enhancers

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7 January 2021

Nucleic-acid-binding properties of hnRNP-U/SAF-A, a nuclear-matrix protein which binds DNA and RNA in vivo and in vitro

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7 January 2021

Yeast calmodulin and a conserved nuclear protein participate in the in vivo binding of a matrix association region

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7 January 2021

A deletion of the human beta-globin locus activation region causes a major alteration in chromatin structure and replication across the entire beta-globin locus.

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7 January 2021

Dependence of enhancer-mediated transcription of the immunoglobulin mu gene on nuclear matrix attachment regions

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DNaseI hypersensitive sites 1, 2 and 3 of the human beta-globin dominant control region direct position-independent expression

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7 January 2021

Each hypersensitive site of the human beta-globin locus control region confers a different developmental pattern of expression on the globin genes.

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7 January 2021

Two cytotoxic cell proteinase genes are differentially sensitive to sodium butyrate

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7 January 2021

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7 January 2021

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7 January 2021

The human beta-interferon gene enhancer is under negative control

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7 January 2021

Different topoisomerase II antitumor drugs direct similar specific long-range fragmentation of an amplified c-MYC gene locus in living cells and in high-salt-extracted nuclei.

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7 January 2021

The structure of a thirty-six kilobase region of the human chromosome including the fibroblast interferon gene IFN-beta

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7 January 2021

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7 January 2021

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7 January 2021

In vitro transcription of eukaryotic genes is affected differently by the degree of DNA supercoiling

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7 January 2021

Bent DNA is a structural feature of scaffold-attached regions in Drosophila melanogaster interphase nuclei.

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7 January 2021

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7 January 2021

A cluster of strong topoisomerase II cleavage sites is located near an integrated human immunodeficiency virus

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7 January 2021

The specificity of human lymphocyte nucleolar DNA long-range fragmentation by endogenous topoisomerase II and exogenous Bal 31 nuclease depends on cell proliferation status

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7 January 2021

Interaction of DNA with nuclear scaffolds in vitro.

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7 January 2021

The attachments of chromatin loops to the nucleoskeleton

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7 January 2021

Nuclear scaffold attachment sites in the human globin gene complexes.

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7 January 2021

Sodium butyrate inhibits myogenesis by interfering with the transcriptional activation function of MyoD and myogenin

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7 January 2021

Position-independent transgene expression mediated by boundary elements from the apolipoprotein B chromatin domain

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7 January 2021

Anchorage of the Chinese hamster dihydrofolate reductase gene to the nuclear scaffold occurs in an intragenic region

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7 January 2021

Specific inhibition of DNA binding to nuclear scaffolds and histone H1 by distamycin. The role of oligo(dA).oligo(dT) tracts

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7 January 2021

Binding specificity of a nuclear scaffold: supercoiled, single-stranded, and scaffold-attached-region DNA.

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7 January 2021

A position-effect assay for boundaries of higher order chromosomal domains

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7 January 2021

A group of scs elements function as domain boundaries in an enhancer-blocking assay

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7 January 2021

Scaffold-attached regions from the human interferon beta domain can be used to enhance the stable expression of genes under the control of various promoters

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7 January 2021

Scaffold-attached regions (SAR elements) mediate transcriptional effects due to butyrate

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7 January 2021

Structural polymorphism of homopurine-homopyrimidine sequences at neutral pH

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7 January 2021

Detection of an altered DNA conformation at specific sites in chromatin and supercoiled DNA

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7 January 2021

Stable DNA unwinding, not "breathing," accounts for single-strand-specific nuclease hypersensitivity of specific A+T-rich sequences

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7 January 2021

Duplication-targeted DNA methylation and mutagenesis in the evolution of eukaryotic chromosomes

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7 January 2021

Scaffold-associated regions: cis-acting determinants of chromatin structural loops and functional domains

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7 January 2021

Butyric acid, a potent inducer of erythroid differentiation in cultured erythroleukemic cells

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7 January 2021

Positive DNA supercoiling generates a chromatin conformation characteristic of highly active genes

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7 January 2021

Position independence and proper developmental control of gamma-globin gene expression require both a 5' locus control region and a downstream sequence element

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7 January 2021

Promoter sequence containing (CT)n.(GA)n repeats is critical for the formation of the DNase I hypersensitive sites in the Drosophila hsp26 gene

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7 January 2021

(CT)n (GA)n repeats and heat shock elements have distinct roles in chromatin structure and transcriptional activation of the Drosophila hsp26 gene

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7 January 2021

Inhibition of transcription in eukaryotic cells by X-irradiation: relation to the loss of topological constraint in closed DNA loops

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7 January 2021

Binding of matrix attachment regions to lamin B1

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7 January 2021

Binding of matrix attachment regions to lamin polymers involves single-stranded regions and the minor groove

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7 January 2021

Shuttling of integrated vectors from mammalian cells to E. coli is mediated by head-to-tail multimeric inserts.

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7 January 2021

Metaphase chromosome structure: Evidence for a radial loop model

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7 January 2021

Reversible methylation and inactivation of marker genes in sequentially transformed tobacco plants.

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7 January 2021

Matrix-attachment regions can impart position-independent regulation of a tissue-specific gene in transgenic mice

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7 January 2021

Hierarchical binding of DNA fragments derived from scaffold-attached regions: correlation of properties in vitro and function in vivo

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7 January 2021

Organization of the higher-order chromatin loop: specific DNA attachment sites on nuclear scaffold

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7 January 2021

Scaffold attachment of DNA loops in metaphase chromosomes.

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7 January 2021

Negative supercoiling of DNA facilitates an interaction between transcription factor IID and the fibroin gene promoter

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7 January 2021

Reduced Position Effect in Mature Transgenic Plants Conferred by the Chicken Lysozyme Matrix-Associated Region

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7 January 2021

DNA in the nucleosome

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7 January 2021

Retroviral integration machinery as a probe for DNA structure and associated proteins.

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7 January 2021

A novel DNA-binding motif in the nuclear matrix attachment DNA-binding protein SATB1

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7 January 2021

The structure of an oligo(dA).oligo(dT) tract and its biological implications

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7 January 2021

Histone acetylation reduces nucleosome core particle linking number change

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7 January 2021

Osmium tetroxide footprinting of a scaffold attachment region in the maize Adh1 promoter

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7 January 2021

The structure of histone-depleted metaphase chromosomes

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7 January 2021

The matrix attachment regions of the chicken lysozyme gene co-map with the boundaries of the chromatin domain.

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7 January 2021

The chicken lysozyme 5' matrix attachment region increases transcription from a heterologous promoter in heterologous cells and dampens position effects on the expression of transfected genes

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7 January 2021

DNA rotational positioning in a regulatory nucleosome is determined by base sequence. An algorithm to model the preferred superhelix

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7 January 2021

SARs stimulate but do not confer position independent gene expression

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7 January 2021

DNA regions associated with the nuclear matrix of Ehrlich ascites cells expose single-stranded sites after deproteinization

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7 January 2021

Poly[d(A · T)]and other synthetic polydeoxynucleotides containing oligoadenosine tracts form nucleosomes easily

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7 January 2021

Structural-functional organization of chromosomal DNA domains

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7 January 2021

Characterization of the chromatin structure in the upstream region of the chicken alpha-globin gene domain

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7 January 2021

An enhancer/locus control region is not sufficient to open chromatin

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7 January 2021

Chromosomal loop/nuclear matrix organization of transcriptionally active and inactive RNA polymerases in HeLa nuclei

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7 January 2021

From the Chromosomal Loops and the Scaffold to the Classic Bands of Metaphase Chromosomes

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7 January 2021

Metaphase chromosome structure: bands arise from a differential folding path of the highly AT-rich scaffold

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7 January 2021

A phage T7 class-III promoter functions as a polymerase II promoter in mammalian cells

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7 January 2021

Redundancy of information in enhancers as a principle of mammalian transcription control

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7 January 2021

Transcriptionally active genome regions are preferred targets for retrovirus integration.

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7 January 2021

A developmental-specific factor binds to suppressor sites flanking the immunoglobulin heavy-chain enhancer.

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7 January 2021

Use of mutated FLP recognition target (FRT) sites for the exchange of expression cassettes at defined chromosomal loci

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7 January 2021

Gene expression within a chromatin domain: the role of core histone hyperacetylation

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7 January 2021

An SAR sequence containing 395 bp DNA fragment mediates enhanced, gene-dosage-correlated expression of a chimaeric heat shock gene in transgenic tobacco plants

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2961235-8

7 January 2021

The effect of sodium butyrate on histone modification

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2961235-8

7 January 2021

Highly preferred targets for retrovirus integration

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2961235-8

7 January 2021

Chromatin domains constitute regulatory units for the control of eukaryotic genes

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2961235-8

7 January 2021

Tissue-specific DNA cleavages in the globin chromatin domain introduced by DNAase I

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2961235-8

7 January 2021

A nuclear DNA attachment element mediates elevated and position-independent gene activity

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2961235-8

7 January 2021

Chromatin structure of the chicken lysozyme gene domain as determined by chromatin fractionation and micrococcal nuclease digestion

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2961235-8

7 January 2021

Excision close to matrix attachment regions of the entire chicken alpha-globin gene domain by nuclease S1 and characterization of the framing structures

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2961235-8

7 January 2021

Effect of sodium butyrate on metallothionein induction and cadmium cytotoxicity in ROS 17/2.8 cells

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2961235-8

7 January 2021

Scaffold attachment regions stimulate HSP70.1 expression in mouse preimplantation embryos but not in differentiated tissues

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2961235-8

7 January 2021

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2961235-8

1 reference

7 January 2021

A new antifungal antibiotic, trichostatin

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2961235-8

7 January 2021

The 87A7 chromomere. Identification of novel chromatin structures flanking the heat shock locus that may define the boundaries of higher order domains

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2961235-8

7 January 2021

The beta-globin dominant control region activates homologous and heterologous promoters in a tissue-specific manner

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2961235-8

7 January 2021

Flavonoid genes in petunia: addition of a limited number of gene copies may lead to a suppression of gene expression

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2961235-8

7 January 2021

Genetic and molecular analysis of chromatin domains.

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2961235-8

7 January 2021

Chromatin structure of the beta-globin chromosomal domain in adult chicken erythrocytes

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2961235-8

7 January 2021

Butyrate suppression of histone deacetylation leads to accumulation of multiacetylated forms of histones H3 and H4 and increased DNase I sensitivity of the associated DNA sequences

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2961235-8

7 January 2021

A non-curved chicken lysozyme 5' matrix attachment site is 3' followed by a strongly curved DNA sequence

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2961235-8

7 January 2021

Chicken MAR binding protein p120 is identical to human heterogeneous nuclear ribonucleoprotein (hnRNP) U.

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2961235-8

7 January 2021

α-globin-gene switching during the development of chicken embryos: Expression and chromosome structure

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2961235-8

7 January 2021

Nucleosome positioning and modification: chromatin structures that potentiate transcription

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2961235-8

7 January 2021

Chromatin fine structure of the histone gene complex of Drosophila melanogaster

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2961235-8

7 January 2021

Transcription generates positively and negatively supercoiled domains in the template.

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2961235-8

7 January 2021

Sodium butyrate selectively induces transcription of promoters adjacent to the MoMSV viral enhancer

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2961235-8

7 January 2021

Reversible arrest of proliferation of rat 3Y1 fibroblasts in both the G1 and G2 phases by trichostatin A

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2961235-8

7 January 2021

A 5' beta-globin matrix-attachment region and the polyoma enhancer together confer position-independent transcription

1 reference

https://api.crossref.org/works/10.1016%2FS0074-7696%2808%2961235-8

7 January 2021

10.1016/S0074-7696(08)61235-8

Identifiers

DOI

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:8575884%20AND%20SRC:MED&resulttype=core&format=json

14 October 2019

1 reference