Home
Random
Nearby
Log in
Settings
Donate
About Wikidata
Disclaimers
Search
(Q41122779)
Watch
English
PopGenome: an efficient Swiss army knife for population genomic analyses in R
scientific article published on 16 April 2014
In more languages
edit
Statements
instance of
scholarly article
1 reference
stated in
Europe PubMed Central
PMCID
4069620
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24739305%20AND%20SRC:MED&resulttype=core&format=json
retrieved
14 March 2020
title
PopGenome: an efficient Swiss army knife for population genomic analyses in R
(English)
1 reference
stated in
Europe PubMed Central
PMCID
4069620
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24739305%20AND%20SRC:MED&resulttype=core&format=json
retrieved
14 March 2020
author
Martin J. Lercher
series ordinal
4
1 reference
stated in
Europe PubMed Central
PMCID
4069620
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24739305%20AND%20SRC:MED&resulttype=core&format=json
retrieved
14 March 2020
Bastian Pfeifer
series ordinal
1
1 reference
stated in
Europe PubMed Central
PMCID
4069620
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24739305%20AND%20SRC:MED&resulttype=core&format=json
retrieved
14 March 2020
Sebastian E Ramos-Onsins
series ordinal
3
1 reference
stated in
Europe PubMed Central
PMCID
4069620
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24739305%20AND%20SRC:MED&resulttype=core&format=json
retrieved
14 March 2020
author name string
Ulrich Wittelsbürger
series ordinal
2
1 reference
stated in
Europe PubMed Central
PMCID
4069620
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24739305%20AND%20SRC:MED&resulttype=core&format=json
retrieved
14 March 2020
publication date
16 April 2014
1 reference
stated in
Europe PubMed Central
PMCID
4069620
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24739305%20AND%20SRC:MED&resulttype=core&format=json
retrieved
14 March 2020
published in
Molecular Biology and Evolution
1 reference
stated in
Europe PubMed Central
PMCID
4069620
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24739305%20AND%20SRC:MED&resulttype=core&format=json
retrieved
14 March 2020
volume
31
1 reference
stated in
Europe PubMed Central
PMCID
4069620
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24739305%20AND%20SRC:MED&resulttype=core&format=json
retrieved
14 March 2020
issue
7
1 reference
stated in
Europe PubMed Central
PMCID
4069620
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24739305%20AND%20SRC:MED&resulttype=core&format=json
retrieved
14 March 2020
page(s)
1929-1936
1 reference
stated in
Europe PubMed Central
PMCID
4069620
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24739305%20AND%20SRC:MED&resulttype=core&format=json
retrieved
14 March 2020
cites work
Understanding genetic variation and function- the applications of next generation sequencing.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4069620
retrieved
27 September 2017
Tabix: fast retrieval of sequence features from generic TAB-delimited files
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4069620
retrieved
27 September 2017
pegas: an R package for population genetics with an integrated-modular approach
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4069620
retrieved
27 September 2017
Frequency spectrum neutrality tests: one for all and all for one.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4069620
retrieved
27 September 2017
Arlequin (version 3.0): an integrated software package for population genetics data analysis
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4069620
retrieved
27 September 2017
R/parallel--speeding up bioinformatics analysis with R
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4069620
retrieved
27 September 2017
A genome-scan method to identify selected loci appropriate for both dominant and codominant markers: a Bayesian perspective
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4069620
retrieved
27 September 2017
adegenet: a R package for the multivariate analysis of genetic markers
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4069620
retrieved
27 September 2017
PLINK: a tool set for whole-genome association and population-based linkage analyses
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4069620
retrieved
27 September 2017
Statistical tests for detecting positive selection by utilizing high-frequency variants
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4069620
retrieved
27 September 2017
Genomic scans for selective sweeps using SNP data
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4069620
retrieved
27 September 2017
VariScan: Analysis of evolutionary patterns from large-scale DNA sequence polymorphism data
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4069620
retrieved
27 September 2017
DnaSP, DNA polymorphism analyses by the coalescent and other methods
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4069620
retrieved
27 September 2017
Statistical properties of new neutrality tests against population growth
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4069620
retrieved
27 September 2017
Generating samples under a Wright-Fisher neutral model of genetic variation
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4069620
retrieved
27 September 2017
Hitchhiking under positive Darwinian selection
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4069620
retrieved
27 September 2017
Balancing selection and MHC.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4069620
retrieved
27 September 2017
Statistical tests of neutrality of mutations against population growth, hitchhiking and background selection
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4069620
retrieved
27 September 2017
A test of neutrality based on interlocus associations
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4069620
retrieved
27 September 2017
Statistical tests of neutrality of mutations
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4069620
retrieved
27 September 2017
Analysis of Gene Diversity in Subdivided Populations
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4069620
retrieved
27 September 2017
Statistical properties of the number of recombination events in the history of a sample of DNA sequences
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4069620
retrieved
27 September 2017
Statistical method for testing the neutral mutation hypothesis by DNA polymorphism
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4069620
retrieved
27 September 2017
Adaptive protein evolution at the Adh locus in Drosophila
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4069620
retrieved
27 September 2017
Analysis of molecular variance inferred from metric distances among DNA haplotypes: application to human mitochondrial DNA restriction data
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4069620
retrieved
27 September 2017
Estimation of levels of gene flow from DNA sequence data
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4069620
retrieved
27 September 2017
Mathematical model for studying genetic variation in terms of restriction endonucleases
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4069620
retrieved
27 September 2017
SweeD: likelihood-based detection of selective sweeps in thousands of genomes
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4069620
retrieved
14 June 2018
MSMS: a coalescent simulation program including recombination, demographic structure and selection at a single locus
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4069620
retrieved
14 June 2018
PGEToolbox: A Matlab toolbox for population genetics and evolution.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4069620
retrieved
14 June 2018
Average number of nucleotide differences in a sample from a single subpopulation: a test for population subdivision
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4069620
retrieved
14 June 2018
A new statistic for detecting genetic differentiation.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4069620
retrieved
14 June 2018
A statistical test for detecting geographic subdivision
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4069620
retrieved
14 June 2018
Whole-genome sequencing of multiple Arabidopsis thaliana populations.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4069620
retrieved
19 August 2018
DNA variation at the rp49 gene region of Drosophila simulans: evolutionary inferences from an unusual haplotype structure
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4069620
retrieved
19 August 2018
Identifiers
DOI
10.1093/MOLBEV/MSU136
1 reference
stated in
Europe PubMed Central
PMCID
4069620
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24739305%20AND%20SRC:MED&resulttype=core&format=json
retrieved
14 March 2020
PMCID
4069620
1 reference
stated in
Europe PubMed Central
PMCID
4069620
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24739305%20AND%20SRC:MED&resulttype=core&format=json
retrieved
14 March 2020
PubMed ID
24739305
1 reference
stated in
Europe PubMed Central
PMCID
4069620
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24739305%20AND%20SRC:MED&resulttype=core&format=json
retrieved
14 March 2020
ResearchGate publication ID
261748257
0 references
Sitelinks
Wikipedia
(0 entries)
edit
Wikibooks
(0 entries)
edit
Wikinews
(0 entries)
edit
Wikiquote
(0 entries)
edit
Wikisource
(0 entries)
edit
Wikiversity
(0 entries)
edit
Wikivoyage
(0 entries)
edit
Wiktionary
(0 entries)
edit
Multilingual sites
(0 entries)
edit
