(Q41350776)

29 September 2017

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title

Protein design: the choice of de novo sequences (English)

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29 September 2017

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Beasley JR

1

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29 September 2017

Hecht MH

series ordinal

2

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29 September 2017

language of work or name

English

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publication date

1 January 1997

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Journal of Biological Chemistry

29 September 2017

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29 September 2017

272

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29 September 2017

2031-2034

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29 September 2017

4

1 reference

A method for construction of long randomized open reading frames and polypeptides

29 September 2017

1 reference

https://api.crossref.org/works/10.1074%2FJBC.272.4.2031

Folded proteins occur frequently in libraries of random amino acid sequences

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.272.4.2031

Cooperatively folded proteins in random sequence libraries

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.272.4.2031

Deciphering the message in protein sequences: tolerance to amino acid substitutions

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.272.4.2031

Systematic mutation of bacteriophage T4 lysozyme.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.272.4.2031

Core-packing constraints, hydrophobicity and protein design

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.272.4.2031

Periodicity of polar and nonpolar amino acids is the major determinant of secondary structure in self-assembling oligomeric peptides

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.272.4.2031

Binary patterning of polar and nonpolar amino acids in the sequences and structures of native proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.272.4.2031

Protein design by binary patterning of polar and nonpolar amino acids

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.272.4.2031

Empirical Predictions of Protein Conformation

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.272.4.2031

A thermodynamic scale for the helix-forming tendencies of the commonly occurring amino acids

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.272.4.2031

Alpha-helix stability in proteins. II. Factors that influence stability at an internal position

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.272.4.2031

Structural basis of amino acid alpha helix propensity

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.272.4.2031

Helix propensities of the amino acids measured in alanine-based peptides without helix-stabilizing side-chain interactions.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.272.4.2031

Intrinsic secondary structure propensities of the amino acids, using statistical phi-psi matrices: comparison with experimental scales.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.272.4.2031

Thermodynamic beta-sheet propensities measured using a zinc-finger host peptide.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.272.4.2031

A thermodynamic scale for the beta-sheet forming tendencies of the amino acids.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.272.4.2031

Origins of structural diversity within sequentially identical hexapeptides

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.272.4.2031

Circular and circularly permuted forms of bovine pancreatic trypsin inhibitor

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.272.4.2031

Correct folding of circularly permuted variants of a beta alpha barrel enzyme in vivo

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.272.4.2031

Are turns required for the folding of ribonuclease T1?

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.272.4.2031

The role of turns in the structure of an alpha-helical protein.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.272.4.2031

Linking an easily detectable phenotype to the folding of a common structural motif. Selection of rare turn mutations that prevent the folding of Rop.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.272.4.2031

Restored heptad pattern continuity does not alter the folding of a four-alpha-helix bundle

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.272.4.2031

Alternate protein frameworks for molecular recognition

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.272.4.2031

Redesigning the topology of a four-helix-bundle protein: monomeric Rop.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.272.4.2031

Amino-acid substitutions in a surface turn modulate protein stability

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.272.4.2031

Sequence replacements in the central beta-turn of plastocyanin

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.272.4.2031

In vitro evolution of thermodynamically stable turns

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.272.4.2031

Engineering of betabellin 14D: disulfide-induced folding of a beta-sheet protein

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.272.4.2031

An analysis of packing in the protein folding problem

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.272.4.2031

Response of a protein structure to cavity-creating mutations and its relation to the hydrophobic effect

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.272.4.2031

Effect of cavity-creating mutations in the hydrophobic core of chymotrypsin inhibitor 2

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.272.4.2031

Structural and energetic responses to cavity-creating mutations in hydrophobic cores: observation of a buried water molecule and the hydrophilic nature of such hydrophobic cavities

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.272.4.2031

The crystal structure of a mutant protein with altered but improved hydrophobic core packing

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.272.4.2031

Redesigning the hydrophobic core of a four-helix-bundle protein

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.272.4.2031

What makes a protein a protein? Hydrophobic core designs that specify stability and structural properties

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.272.4.2031

A switch between two-, three-, and four-stranded coiled coils in GCN4 leucine zipper mutants

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.272.4.2031

An engineered allosteric switch in leucine-zipper oligomerization

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.272.4.2031

Side-chain entropy and packing in proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.272.4.2031

The protein-folding problem: the native fold determines packing, but does packing determine the native fold?

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.272.4.2031

Active barnase variants with completely random hydrophobic cores

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.272.4.2031

De novo design, expression, and characterization of Felix: a four-helix bundle protein of native-like sequence

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.272.4.2031

Characterization of a helical protein designed from first principles

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.272.4.2031

Principles of protein folding--a perspective from simple exact models.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.272.4.2031

De novo design of beta-sheet proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.272.4.2031

Measurement of the β-sheet-forming propensities of amino acids

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.272.4.2031

Context is a major determinant of β-sheet propensity

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.272.4.2031

Context-dependent secondary structure formation of a designed protein sequence

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.272.4.2031

21 January 2018

Identifiers

DOI

10.1074/JBC.272.4.2031

1 reference

release_fkzu4aqkvngs7ed5cclyjgtoce

29 September 2017

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/fkzu4aqkvngs7ed5cclyjgtoce

mapped directly with Wikidata item

24 November 2022

based on heuristic

1 reference