(Q41612070)

5 October 2017

title

Restrained molecular dynamics of solvated duplex DNA using the particle mesh Ewald method (English)

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5 October 2017

Konerding DE

1

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5 October 2017

Cheatham TE 3rd

series ordinal

2

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5 October 2017

Kollman PA

series ordinal

3

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5 October 2017

James TL

series ordinal

4

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5 October 2017

publication date

1 February 1999

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Journal of Biomolecular NMR

5 October 2017

published in

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5 October 2017

volume

13

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5 October 2017

issue

2

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5 October 2017

page(s)

119-131

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https://scigraph.springernature.com/pub.10.1023/a:1008353423074

5 October 2017

exact match

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cites work

Molecular structure of a left-handed double helical DNA fragment at atomic resolution

1 reference

12 December 2020

Observation of the A-DNA to B-DNA transition during unrestrained molecular dynamics in aqueous solution

1 reference

12 December 2020

Probability assessment of conformational ensembles: sugar repuckering in a DNA duplex in solution

1 reference

12 December 2020

A 5-nanosecond molecular dynamics trajectory for B-DNA: analysis of structure, motions, and solvation

1 reference

12 December 2020

Solution structure of a conserved DNA sequence from the HIV-1 genome: restrained molecular dynamics simulation with distance and torsion angle restraints derived from two-dimensional NMR spectra

1 reference

12 December 2020

Interproton distance bounds from 2D NOE intensities: effect of experimental noise and peak integration errors.

1 reference

12 December 2020

Systematic study of nuclear Overhauser effects vis-à-vis local helical parameters, sugar puckers, and glycosidic torsions in B DNA: insensitivity of NOE to local transitions in B DNA oligonucleotides due to internal structural compensations

1 reference

12 December 2020

Helical periodicity of DNA determined by enzyme digestion

1 reference

12 December 2020

How to generate accurate solution structures of double-helical nucleic acid fragments using nuclear magnetic resonance and restrained molecular dynamics.

1 reference

12 December 2020

Conformational and helicoidal analysis of 30 PS of molecular dynamics on the d(CGCGAATTCGCG) double helix: "curves", dials and windows.

1 reference

12 December 2020

Defining the structure of irregular nucleic acids: conventions and principles

1 reference

12 December 2020

The octamer motif in immunoglobulin genes: extraction of structural constraints from two-dimensional NMR studies

1 reference

12 December 2020

Calculations of nucleic acid conformations

1 reference

12 December 2020

Solution structure of the octamer motif in immunoglobulin genes via restrained molecular dynamics calculations

1 reference

12 December 2020

Identifiers

DOI

10.1023/A:1008353423074

1 reference

Dimensions Publication ID

5 October 2017

1025921461

0 references

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