(Q41744412)

8 October 2017

Chromosome position effects on gene expression in Escherichia coli K-12. (English)

1 reference

8 October 2017

1 reference

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25209233%20AND%20SRC:MED&resulttype=core&format=json

1 June 2020

author name string

Jack A Bryant

series ordinal

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25209233%20AND%20SRC:MED&resulttype=core&format=json

1 June 2020

Laura E Sellars

series ordinal

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25209233%20AND%20SRC:MED&resulttype=core&format=json

1 June 2020

David J Lee

series ordinal

4

1 reference

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1 June 2020

publication date

10 September 2014

1 reference

8 October 2017

Nucleic Acids Research

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25209233%20AND%20SRC:MED&resulttype=core&format=json

1 June 2020

volume

42

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25209233%20AND%20SRC:MED&resulttype=core&format=json

1 June 2020

issue

18

1 reference

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1 June 2020

page(s)

11383-11392

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25209233%20AND%20SRC:MED&resulttype=core&format=json

Creative Commons Attribution 4.0 International

1 June 2020

copyright license

start time

11 November 2016

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

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6 June 2018

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Genome conformation capture reveals that the Escherichia coli chromosome is organized by replication and transcription

6 June 2018

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Non-canonical protein-DNA interactions identified by ChIP are not artifacts.

6 June 2018

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DNA thermodynamic stability and supercoil dynamics determine the gene expression program during the bacterial growth cycle

6 June 2018

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Dependence of transcription-coupled DNA supercoiling on promoter strength in Escherichia coli topoisomerase I deficient strains

6 June 2018

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Rates of gyrase supercoiling and transcription elongation control supercoil density in a bacterial chromosome

6 June 2018

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6 June 2018

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Superresolution imaging of ribosomes and RNA polymerase in live Escherichia coli cells

6 June 2018

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Gene order and chromosome dynamics coordinate spatiotemporal gene expression during the bacterial growth cycle

6 June 2018

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Genomic analysis of DNA binding and gene regulation by homologous nucleoid-associated proteins IHF and HU in Escherichia coli K12.

6 June 2018

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Location and dynamics of an active promoter in Escherichia coli K-12

6 June 2018

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Chromosomal macrodomains and associated proteins: implications for DNA organization and replication in gram negative bacteria

6 June 2018

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H-NS silences gfp, the green fluorescent protein gene: gfpTCD is a genetically Remastered gfp gene with reduced susceptibility to H-NS-mediated transcription silencing and with enhanced translation.

6 June 2018

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Gene doctoring: a method for recombineering in laboratory and pathogenic Escherichia coli strains

6 June 2018

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A model for all genomes: the role of transcription factories

6 June 2018

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Protein occupancy landscape of a bacterial genome

6 June 2018

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Domain organization of human chromosomes revealed by mapping of nuclear lamina interactions

6 June 2018

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Genome-wide analysis of Fis binding in Escherichia coli indicates a causative role for A-/AT-tracts

6 June 2018

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Chromatin structure and the regulation of gene expression: the lessons of PEV in Drosophila

6 June 2018

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Thirty years of Escherichia coli DNA gyrase: from in vivo function to single-molecule mechanism.

6 June 2018

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Coupling the distribution of RNA polymerase to global gene regulation and the dynamic structure of the bacterial nucleoid in Escherichia coli

6 June 2018

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Organization of supercoil domains and their reorganization by transcription

6 June 2018

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Identification of the omega4406 regulatory region, a developmental promoter of Myxococcus xanthus, and a DNA segment responsible for chromosomal position-dependent inhibition of gene expression.

6 June 2018

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Spatial patterns of transcriptional activity in the chromosome of Escherichia coli

6 June 2018

1 reference

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Macrodomain organization of the Escherichia coli chromosome.

6 June 2018

1 reference

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Topological domain structure of the Escherichia coli chromosome

6 June 2018

1 reference

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Analysis of Relative Gene Expression Data Using Real-Time Quantitative PCR and the 2−ΔΔCT Method

6 June 2018

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Dual repression by Fe(2+)-Fur and Mn(2+)-MntR of the mntH gene, encoding an NRAMP-like Mn(2+) transporter in Escherichia coli

6 June 2018

1 reference

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One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products

6 June 2018

1 reference

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Compartmentalization of transcription and translation in Bacillus subtilis

6 June 2018

1 reference

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Modulation of gene expression through chromosomal positioning in Escherichia coli.

6 June 2018

1 reference

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Selectivity of the Escherichia coli RNA polymerase E sigma 38 for overlapping promoters and ability to support CRP activation

6 June 2018

1 reference

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Chromosome replication and the division cycle of Escherichia coli B/r.

6 June 2018

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Gene location affects expression level in Salmonella typhimurium

6 June 2018

1 reference

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Supercoiling of the DNA template during transcription

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4191405

Position effects on eukaryotic gene expression

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4191405

Localization of transcribing genes in the bacterial cell by means of high resolution autoradiography

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4191405

Chromatin position effects assayed by thousands of reporters integrated in parallel

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4191405

DNA topology of highly transcribed operons in Salmonella enterica serovar Typhimurium.

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4191405

The MatP/matS site-specific system organizes the terminus region of the E. coli chromosome into a macrodomain.

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4191405

DNA dynamics vary according to macrodomain topography in the E. coli chromosome.

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4191405

Activation and silencing of leu-500 promoter by transcription-induced DNA supercoiling in the Salmonella chromosome.

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4191405

Conversion of temperature-sensitive to -resistant gene expression due to mutations in the promoter region of the melibiose operon in Escherichia coli.

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4191405

Chromosomal domains of supercoiling in Salmonella typhimurium.

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4191405

Chromosomal supercoiling in Escherichia coli

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4191405

Genome architecture and global gene regulation in bacteria: making progress towards a unified model?

18 August 2018

1 reference

12 December 2020

Transposition of the Lac region of E. coli

1 reference

12 December 2020

The alpha-galactosidase from Escherichia coli K12

1 reference

12 December 2020

The effect of gene concentration and relative gene dosage on gene output in Escherichia coli

1 reference

12 December 2020

Topological insulators inhibit diffusion of transcription-induced positive supercoils in the chromosome of Escherichia coli

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12 December 2020

Identifiers

DOI

10.1093/NAR/GKU828

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25209233%20AND%20SRC:MED&resulttype=core&format=json

1 June 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25209233%20AND%20SRC:MED&resulttype=core&format=json

1 June 2020

PubMed publication ID

25209233

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25209233%20AND%20SRC:MED&resulttype=core&format=json