(Q41886972)

English

RNA polymerase V functions in Arabidopsis interphase heterochromatin organization independently of the 24-nt siRNA-directed DNA methylation pathway

scientific article published on 24 March 2009

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scholarly article

1 reference

Europe PubMed Central

PMC publication ID

13 October 2017

RNA polymerase V functions in Arabidopsis interphase heterochromatin organization independently of the 24-nt siRNA-directed DNA methylation pathway (English)

1 reference

Europe PubMed Central

PMC publication ID

13 October 2017

DNA methylation

0 references

author name string

Olga Pontes

1

1 reference

Europe PubMed Central

PMC publication ID

13 October 2017

Pedro Costa-Nunes

2

1 reference

Europe PubMed Central

PMC publication ID

13 October 2017

Paul Vithayathil

3

1 reference

Europe PubMed Central

PMC publication ID

13 October 2017

Craig S Pikaard

4

1 reference

Europe PubMed Central

PMC publication ID

13 October 2017

publication date

24 March 2009

1 reference

Europe PubMed Central

PMC publication ID

13 October 2017

Plant Physiology Journal

1 reference

Europe PubMed Central

PMC publication ID

13 October 2017

2

1 reference

Europe PubMed Central

PMC publication ID

13 October 2017

4

1 reference

Europe PubMed Central

PMC publication ID

13 October 2017

700-710

1 reference

Europe PubMed Central

PMC publication ID

13 October 2017

describes a project that uses

1 reference

Europe PubMed Central

11 June 2022

https://www.ebi.ac.uk/europepmc/webservices/rest/PMC2902898/fullTextXML

based on heuristic

inferred from PubMed Central ID database lookup

Noncoding transcription by RNA polymerase Pol IVb/Pol V mediates transcriptional silencing of overlapping and adjacent genes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2902898

5 June 2018

A structural-maintenance-of-chromosomes hinge domain-containing protein is required for RNA-directed DNA methylation.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2902898

5 June 2018

Noncoding RNAs and gene silencing

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2902898

5 June 2018

Endogenous targets of RNA-directed DNA methylation and Pol IV in Arabidopsis.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2902898

5 June 2018

Differential regulation of strand-specific transcripts from Arabidopsis centromeric satellite repeats

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2902898

5 June 2018

Partially redundant functions of Arabidopsis DICER-like enzymes and a role for DCL4 in producing trans-acting siRNAs.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2902898

5 June 2018

Dicer-deficient mouse embryonic stem cells are defective in differentiation and centromeric silencing

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2902898

5 June 2018

RNA polymerase IV directs silencing of endogenous DNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2902898

5 June 2018

Centromere-encoded RNAs are integral components of the maize kinetochore.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2902898

5 June 2018

Centromeric chromatin exhibits a histone modification pattern that is distinct from both euchromatin and heterochromatin

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2902898

5 June 2018

RITS acts in cis to promote RNA interference-mediated transcriptional and post-transcriptional silencing

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2902898

5 June 2018

Chromatin-based silencing mechanisms

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2902898

5 June 2018

Mouse centric and pericentric satellite repeats form distinct functional heterochromatin

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2902898

5 June 2018

Dicer is essential for formation of the heterochromatin structure in vertebrate cells

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2902898

5 June 2018

Yeast telomerase RNA: a flexible scaffold for protein subunits

1 reference

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5 June 2018

Involvement of putative SNF2 chromatin remodeling protein DRD1 in RNA-directed DNA methylation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2902898

5 June 2018

Genetic and functional diversification of small RNA pathways in plants

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2902898

5 June 2018

RNAi-mediated targeting of heterochromatin by the RITS complex

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2902898

5 June 2018

Natural variation in nucleolar dominance reveals the relationship between nucleolus organizer chromatin topology and rRNA gene transcription in Arabidopsis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2902898

5 June 2018

Heterochromatin and epigenetic control of gene expression

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2902898

5 June 2018

RNA interference is required for normal centromere function in fission yeast

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2902898

5 June 2018

RNAs templating chromatin structure for dosage compensation in animals

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2902898

5 June 2018

Centromere satellites from Arabidopsis populations: maintenance of conserved and variable domains

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2902898

5 June 2018

RNA interference machinery regulates chromosome dynamics during mitosis and meiosis in fission yeast

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2902898

5 June 2018

DNA methylation controls histone H3 lysine 9 methylation and heterochromatin assembly in Arabidopsis.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2902898

5 June 2018

Interphase chromosomes in Arabidopsis are organized as well defined chromocenters from which euchromatin loops emanate

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2902898

5 June 2018

Coordinated methyl and RNA binding is required for heterochromatin localization of mammalian HP1alpha

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2902898

5 June 2018

Regulation of heterochromatic silencing and histone H3 lysine-9 methylation by RNAi

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2902898

5 June 2018

RNA interference

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2902898

5 June 2018

DNA methylation and the regulation of gene transcription

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2902898

5 June 2018

Domain organization at the centromere and neocentromere

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2902898

5 June 2018

Requirement of heterochromatin for cohesion at centromeres

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2902898

5 June 2018

Analysis of the genome sequence of the flowering plant Arabidopsis thaliana

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2902898

5 June 2018

Histone H4 acetylation of euchromatin and heterochromatin is cell cycle dependent and correlated with replication rather than with transcription

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2902898

5 June 2018

Splitting the chromosome: cutting the ties that bind sister chromatids

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2902898

5 June 2018

Polymorphisms and genomic organization of repetitive DNA from centromeric regions of Arabidopsis chromosomes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2902898

5 June 2018

Transcription sites are not correlated with chromosome territories in wheat nuclei

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2902898

5 June 2018

Centromere DNA dynamics: latent centromeres and neocentromere formation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2902898

5 June 2018

Characterization of an Arabidopsis thaliana DNA hypomethylation mutant

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2902898

5 June 2018

Mouse satellite DNA is transcribed in senescent cardiac muscle.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2902898

5 June 2018

Distinct catalytic and non-catalytic roles of ARGONAUTE4 in RNA-directed DNA methylation.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2902898

18 August 2018

An ARGONAUTE4-containing nuclear processing center colocalized with Cajal bodies in Arabidopsis thaliana.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2902898

18 August 2018

Distinct regulation of histone H3 methylation at lysines 27 and 9 by CpG methylation in Arabidopsis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2902898

18 August 2018

Atypical RNA polymerase subunits required for RNA-directed DNA methylation.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2902898

18 August 2018

Plant nuclear RNA polymerase IV mediates siRNA and DNA methylation-dependent heterochromatin formation.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2902898

18 August 2018

Role of Arabidopsis ARGONAUTE4 in RNA-directed DNA methylation triggered by inverted repeats.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2902898

18 August 2018

RNA silencing genes control de novo DNA methylation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2902898

18 August 2018

Epigenetic assembly of centromeric chromatin at ectopic alpha-satellite sites on human chromosomes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2902898

18 August 2018

Role of CG and non-CG methylation in immobilization of transposons in Arabidopsis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2902898

18 August 2018

Centromeric localization and adaptive evolution of an Arabidopsis histone H3 variant.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2902898

18 August 2018

Higher-order structure in pericentric heterochromatin involves a distinct pattern of histone modification and an RNA component

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2902898

18 August 2018

The centromere1 (CEN1) region of Arabidopsis thaliana: architecture and functional impact of chromatin.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2902898

18 August 2018

Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2902898

18 August 2018

A novel repetitive sequence associated with the centromeric regions of Arabidopsis thaliana chromosomes.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2902898

18 August 2018

Distinct centromere domain structures with separate functions demonstrated in live fission yeast cells

1 reference

https://pubmed.ncbi.nlm.nih.gov/19825650

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Arabidopsis thaliana DNA methylation mutants

1 reference

https://pubmed.ncbi.nlm.nih.gov/19825650

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Arabidopsis thaliana centromere regions: genetic map positions and repetitive DNA structure

1 reference

https://pubmed.ncbi.nlm.nih.gov/19825650

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Near the edge of a chromosome's "black hole"

1 reference

https://pubmed.ncbi.nlm.nih.gov/19825650

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The Arabidopsis chromatin-modifying nuclear siRNA pathway involves a nucleolar RNA processing center

1 reference

https://pubmed.ncbi.nlm.nih.gov/19825650

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1093/MP/SSP006

1 reference

Europe PubMed Central

PMC publication ID

13 October 2017

PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

13 October 2017

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

13 October 2017

ResearchGate publication ID

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