(Q41896635)

13 October 2017

DrugScorePPI webserver: fast and accurate in silico alanine scanning for scoring protein-protein interactions (English)

1 reference

protein-protein interaction

13 October 2017

1 reference

1 reference

1 reference

Dennis M Krüger

1

1 reference

PMC publication ID

2896140

13 October 2017

Holger Gohlke

series ordinal

2

1 reference

13 October 2017

28 May 2010

1 reference

13 October 2017

Nucleic Acids Research

1 reference

13 October 2017

38

1 reference

13 October 2017

Web Server issue

1 reference

13 October 2017

W480-6

1 reference

Creative Commons Attribution-NonCommercial 2.5 Generic

13 October 2017

start time

4 October 2016

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

Prediction of hot spot residues at protein-protein interfaces by combining machine learning and energy-based methods

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896140

A feature-based approach to modeling protein-protein interaction hot spots.

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896140

Small-molecule inhibitors of protein-protein interactions

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896140

DrugScoreRNA--knowledge-based scoring function to predict RNA-ligand interactions

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896140

Protein-protein interaction hotspots carved into sequences

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896140

Chemical double-mutant cycles: dissecting non-covalent interactions

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896140

Targeting protein-protein interactions with small molecules: challenges and perspectives for computational binding epitope detection and ligand finding

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896140

The FoldX web server: an online force field

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896140

Protein structure prediction and analysis using the Robetta server.

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896140

Insights into protein-protein binding by binding free energy calculation and free energy decomposition for the Ras-Raf and Ras-RalGDS complexes.

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896140

Kinetic and affinity predictions of a protein-protein interaction using multivariate experimental design

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896140

A combined experimental and computational strategy to define protein interaction networks for peptide recognition modules

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896140

Protein Data Bank (PDB): database of three-dimensional structural information of biological macromolecules

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896140

Anatomy of hot spots in protein interfaces

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896140

A hot spot of binding energy in a hormone-receptor interface

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896140

A detailed thermodynamic analysis of ras/effector complex interfaces

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896140

ASEdb: a database of alanine mutations and their effects on the free energy of binding in protein interactions

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896140

Knowledge-based scoring function to predict protein-ligand interactions.

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896140

An iterative knowledge-based scoring function for protein-protein recognition

18 August 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20511591

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Predicting free energy changes using structural ensembles

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20511591

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1093/NAR/GKQ471

1 reference

13 October 2017

journals/nar/KrugerG10

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

PMC publication ID

2896140

13 October 2017

PubMed publication ID

20511591

1 reference

PMC publication ID

2896140