(Q41899569)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18806003%20AND%20SRC:MED&resulttype=core&format=json

14 January 2020

title

Global transcription and metabolic flux analysis of Escherichia coli in glucose-limited fed-batch cultivations (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18806003%20AND%20SRC:MED&resulttype=core&format=json

14 January 2020

1 reference

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18806003%20AND%20SRC:MED&resulttype=core&format=json

14 January 2020

author name string

K Lemuth

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18806003%20AND%20SRC:MED&resulttype=core&format=json

14 January 2020

T Hardiman

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18806003%20AND%20SRC:MED&resulttype=core&format=json

14 January 2020

S Winter

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18806003%20AND%20SRC:MED&resulttype=core&format=json

14 January 2020

M A Keller

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18806003%20AND%20SRC:MED&resulttype=core&format=json

14 January 2020

S Lange

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18806003%20AND%20SRC:MED&resulttype=core&format=json

14 January 2020

M Reuss

7

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18806003%20AND%20SRC:MED&resulttype=core&format=json

14 January 2020

R D Schmid

8

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18806003%20AND%20SRC:MED&resulttype=core&format=json

14 January 2020

M Siemann-Herzberg

9

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18806003%20AND%20SRC:MED&resulttype=core&format=json

14 January 2020

language of work or name

English

0 references

publication date

19 September 2008

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18806003%20AND%20SRC:MED&resulttype=core&format=json

Applied and Environmental Microbiology

14 January 2020

published in

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18806003%20AND%20SRC:MED&resulttype=core&format=json

14 January 2020

volume

74

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18806003%20AND%20SRC:MED&resulttype=core&format=json

14 January 2020

issue

22

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18806003%20AND%20SRC:MED&resulttype=core&format=json

14 January 2020

page(s)

7002-7015

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18806003%20AND%20SRC:MED&resulttype=core&format=json

describes a project that uses

14 January 2020

limma

1 reference

22 June 2022

https://europepmc.org/article/PMC/2583496

based on heuristic

inferred from PubMed Central ID database lookup

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Identification of metabolic fluxes in hepatic cells from transient 13C-labeling experiments: Part II. Flux estimation

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Topology of the global regulatory network of carbon limitation in Escherichia coli

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5 June 2018

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Putative regulatory sites unraveled by network-embedded thermodynamic analysis of metabolome data

5 June 2018

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Linear models and empirical bayes methods for assessing differential expression in microarray experiments

5 June 2018

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LrhA regulates rpoS translation in response to the Rcs phosphorelay system in Escherichia coli

5 June 2018

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Crystallization and preliminary X-ray analysis of Mlc from Escherichia coli.

5 June 2018

1 reference

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Global physiological analysis of carbon- and energy-limited growing Escherichia coli confirms a high degree of catabolic flexibility and preparedness for mixed substrate utilization

5 June 2018

1 reference

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Systematic search for the Cra-binding promoters using genomic SELEX system.

5 June 2018

1 reference

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Improvement of Escherichia coli production strains by modification of the phosphoenolpyruvate:sugar phosphotransferase system

5 June 2018

1 reference

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ppGpp: a global regulator in Escherichia coli.

5 June 2018

1 reference

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Genome-wide analysis of the general stress response network in Escherichia coli: sigmaS-dependent genes, promoters, and sigma factor selectivity

5 June 2018

1 reference

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5 June 2018

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Molecular components of physiological stress responses in Escherichia coli.

5 June 2018

1 reference

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The DNA binding protein H-NS binds to and alters the stability of RNA in vitro and in vivo

5 June 2018

1 reference

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Gene regulation in prokaryotes by subcellular relocalization of transcription factors

5 June 2018

1 reference

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Normalization of cDNA microarray data

5 June 2018

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Metabolic flux analysis of pykF gene knockout Escherichia coli based on 13C-labeling experiments together with measurements of enzyme activities and intracellular metabolite concentrations

5 June 2018

1 reference

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The rotary motor of bacterial flagella

5 June 2018

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Fundamentals of experimental design for cDNA microarrays

5 June 2018

1 reference

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Signal transduction and regulatory mechanisms involved in control of the sigma(S) (RpoS) subunit of RNA polymerase

5 June 2018

1 reference

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5 June 2018

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Hungry bacteria--definition and properties of a nutritional state

5 June 2018

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Escherichia coli ribosome-associated protein SRA, whose copy number increases during stationary phase

5 June 2018

1 reference

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Mechanism of regulation of transcription initiation by ppGpp. II. Models for positive control based on properties of RNAP mutants and competition for RNAP.

5 June 2018

1 reference

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Mechanism of regulation of transcription initiation by ppGpp. I. Effects of ppGpp on transcription initiation in vivo and in vitro

5 June 2018

1 reference

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Coupling of flagellar gene expression to flagellar assembly in Salmonella enterica serovar typhimurium and Escherichia coli

5 June 2018

1 reference

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Pathway analysis and metabolic engineering in Corynebacterium glutamicum.

5 June 2018

1 reference

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Multiple control of flagellum biosynthesis in Escherichia coli: role of H-NS protein and the cyclic AMP-catabolite activator protein complex in transcription of the flhDC master operon

5 June 2018

1 reference

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'Growth of bacterial cultures' 50 years on: towards an uncertainty principle instead of constants in bacterial growth kinetics

5 June 2018

1 reference

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Regulation by nutrient limitation

5 June 2018

1 reference

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Growth kinetics of suspended microbial cells: from single-substrate-controlled growth to mixed-substrate kinetics

5 June 2018

1 reference

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Maltose/maltodextrin system of Escherichia coli: transport, metabolism, and regulation

5 June 2018

1 reference

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Cra and the control of carbon flux via metabolic pathways

5 June 2018

1 reference

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Molecular characterization of glucokinase from Escherichia coli K-12.

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2583496

High cell-density culture of Escherichia coli

5 June 2018

1 reference

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Adaptation to life at micromolar nutrient levels: the regulation of Escherichia coli glucose transport by endoinduction and cAMP.

5 June 2018

1 reference

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The global regulatory protein FruR modulates the direction of carbon flow in Escherichia coli

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2583496

Genetics of pentose-phosphate pathway enzymes of Escherichia coli K-12.

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2583496

Survival of hunger and stress: the role of rpoS in early stationary phase gene regulation in E. coli

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2583496

Determination of the growth rate-regulated steps in expression of the Escherichia coli K-12 gnd gene

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2583496

Synthesis of the stationary-phase sigma factor sigma s is positively regulated by ppGpp

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2583496

Phosphoenolpyruvate:carbohydrate phosphotransferase systems of bacteria

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2583496

The galactose regulon of Escherichia coli

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2583496

The role of the sigma factor sigma S (KatF) in bacterial global regulation

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2583496

Adenylate cyclase is required for chemotaxis to phosphotransferase system sugars by Escherichia coli

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2583496

Evidence against direct involvement of cyclic GMP or cyclic AMP in bacterial chemotactic signaling

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2583496

The nucleotide sequence of the malT gene encoding the positive regulator of the Escherichia coli maltose regulon

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2583496

Genetic and physical analyses of the growth rate-dependent regulation of Escherichia coli zwf expression

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2583496

Recombinant protein expression in high cell density fed-batch cultures of Escherichia coli

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2583496

Growth-rate-dependent alteration of 6-phosphogluconate dehydrogenase and glucose 6-phosphate dehydrogenase levels in Escherichia coli K-12

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2583496

Dynamic modeling of the central carbon metabolism of Escherichia coli.

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2583496

Metabolic flux analysis at ultra short time scale: isotopically non-stationary 13C labeling experiments.

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2583496

Use of within-array replicate spots for assessing differential expression in microarray experiments

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2583496

A novel metabolic cycle catalyzes glucose oxidation and anaplerosis in hungry Escherichia coli.

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2583496

Short- and long-term changes in proteome composition and kinetic properties in a culture of Escherichia coli during transition from glucose-excess to glucose-limited growth conditions in continuous culture and vice versa

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2583496

The generation of multiple co-existing mal-regulatory mutations through polygenic evolution in glucose-limited populations of Escherichia coli

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2583496

Modeling of overflow metabolism in batch and fed-batch cultures of Escherichia coli.

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2583496

Control of the expression of the manXYZ operon in Escherichia coli: Mlc is a negative regulator of the mannose PTS.

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2583496

18 August 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/18806003

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/18806003

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1128/AEM.01327-08

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18806003%20AND%20SRC:MED&resulttype=core&format=json

14 January 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18806003%20AND%20SRC:MED&resulttype=core&format=json

14 January 2020

PubMed publication ID

18806003

1 reference