(Q42003263)

English

Addition of side chain interactions to modified Lifson-Roig helix-coil theory: application to energetics of phenylalanine-methionine interactions.

scientific article published on November 1995

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scholarly article

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:8563636%20AND%20SRC:MED&resulttype=core&format=json

14 October 2019

Addition of side chain interactions to modified Lifson-Roig helix-coil theory: application to energetics of phenylalanine-methionine interactions (English)

1 reference

Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:8563636%20AND%20SRC:MED&resulttype=core&format=json

14 October 2019

3

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14 October 2019

author name string

Stapley BJ

1

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14 October 2019

Rohl CA

2

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14 October 2019

publication date

1 November 1995

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14 October 2019

Protein Science

1 reference

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:8563636%20AND%20SRC:MED&resulttype=core&format=json

14 October 2019

4

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14 October 2019

11

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14 October 2019

2383-2391

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:8563636%20AND%20SRC:MED&resulttype=core&format=json

14 October 2019

The structure of proteins; two hydrogen-bonded helical configurations of the polypeptide chain

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143019

5 June 2018

Aromatic side-chain contribution to far-ultraviolet circular dichroism of helical peptides and its effect on measurement of helix propensities

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143019

5 June 2018

Helical peptides with three pairs of Asp-Arg and Glu-Arg residues in different orientations and spacings

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143019

5 June 2018

Stabilization of alpha-helical structures in short peptides via end capping

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143019

5 June 2018

Probing weakly polar interactions in cytochrome c

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143019

5 June 2018

Rules for alpha-helix termination by glycine

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143019

5 June 2018

Helix propensities of the amino acids measured in alanine-based peptides without helix-stabilizing side-chain interactions.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143019

5 June 2018

Discovering structural correlations in alpha-helices

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143019

5 June 2018

How much is a stabilizing bond worth?

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143019

5 June 2018

Elucidating the folding problem of helical peptides using empirical parameters. II. Helix macrodipole effects and rational modification of the helical content of natural peptides.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143019

5 June 2018

Cooperativity in protein-folding kinetics

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143019

5 June 2018

N- and C-capping preferences for all 20 amino acids in alpha-helical peptides

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143019

5 June 2018

Interactions between hydrophobic side chains within alpha-helices

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143019

5 June 2018

Incorporation of pairwise interactions into the Lifson-Roig model for helix prediction

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143019

5 June 2018

Strong interaction between disulfide derivatives and aromatic groups in peptides and proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143019

5 June 2018

Hydrogen bonding in globular proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143019

5 June 2018

Helix geometry in proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143019

5 June 2018

Amino acid preferences for specific locations at the ends of alpha helices

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143019

5 June 2018

Helix stabilization by Glu-...Lys+ salt bridges in short peptides of de novo design

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143019

5 June 2018

Helix signals in proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143019

5 June 2018

Capping and alpha-helix stability

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143019

5 June 2018

Calculation of conformational ensembles from potentials of mean force. An approach to the knowledge-based prediction of local structures in globular proteins.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143019

5 June 2018

pH-induced denaturation of proteins: a single salt bridge contributes 3-5 kcal/mol to the free energy of folding of T4 lysozyme

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143019

5 June 2018

Large differences in the helix propensities of alanine and glycine

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143019

5 June 2018

On alpha-helices terminated by glycine. 1. Identification of common structural features.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143019

5 June 2018

The helix-coil transition in heterogeneous peptides with specific side-chain interactions: Theory and comparison with CD spectral data

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143019

5 June 2018

Parameters of helix-coil transition theory for alanine-based peptides of varying chain lengths in water

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143019

5 June 2018

Kinetics of amide proton exchange in helical peptides of varying chain lengths. Interpretation by the Lifson-Roig equation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143019

5 June 2018

The energetics of ion-pair and hydrogen-bonding interactions in a helical peptide

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143019

17 August 2018

Determination of free energies of N-capping in alpha-helices by modification of the Lifson-Roig helix-coil therapy to include N- and C-capping.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143019

17 August 2018

Estimation of changes in side chain configurational entropy in binding and folding: general methods and application to helix formation.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143019

17 August 2018

Tests for helix-stabilizing interactions between various nonpolar side chains in alanine-based peptides

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143019

17 August 2018

Side-chain interactions between sulfur-containing amino acids and phenylalanine in alpha-helices.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143019

17 August 2018

Relative helix-forming tendencies of nonpolar amino acids

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143019

17 August 2018

Derivative sspectroscopy applied to tyrosyl chromophores. Studies on ribonuclease, lima bean inhibitors, insulin, and pancreatic trypsin inhibitor

1 reference

https://pubmed.ncbi.nlm.nih.gov/8563636

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Effect of amino acid ion pairs on peptide helicity

1 reference

https://pubmed.ncbi.nlm.nih.gov/8563636

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The Glu 2- ... Arg 10+ side-chain interaction in the C-peptide helix of ribonuclease A

1 reference

https://pubmed.ncbi.nlm.nih.gov/8563636

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A model peptide with enhanced helicity

1 reference

https://pubmed.ncbi.nlm.nih.gov/8563636

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

NMR determination of residual structure in a urea-denatured protein, the 434-repressor

1 reference

https://pubmed.ncbi.nlm.nih.gov/8563636

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The (i, i + 4) Phe-His interaction studied in an alanine-based alpha-helix

1 reference

https://pubmed.ncbi.nlm.nih.gov/8563636

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Termination of right handed helices in proteins by residues in left handed helical conformations

1 reference

https://pubmed.ncbi.nlm.nih.gov/8563636

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Design of helix ends. Amino acid preferences, hydrogen bonding and electrostatic interactions

1 reference

https://pubmed.ncbi.nlm.nih.gov/8563636

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Helix-stabilizing Interaction Between Tyrosine and Leucine or Valine when the Spacing is i,i + 4

1 reference

https://pubmed.ncbi.nlm.nih.gov/8563636

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

NMR study of 1:1 complexes between divalent sulfur and aromatic compounds: a model for interactions in globular proteins

1 reference

https://pubmed.ncbi.nlm.nih.gov/8563636

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1002/PRO.5560041117

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:8563636%20AND%20SRC:MED&resulttype=core&format=json

14 October 2019

PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:8563636%20AND%20SRC:MED&resulttype=core&format=json

14 October 2019

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:8563636%20AND%20SRC:MED&resulttype=core&format=json

14 October 2019

ResearchGate publication ID

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