(Q42024564)

English

Tricksy business: transcriptome analysis reveals the involvement of thioredoxin A in redox homeostasis, oxidative stress, sulfur metabolism, and cellular differentiation in Bacillus subtilis

scientific article published on June 2005

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scholarly article

1 reference

Europe PubMed Central

PMC publication ID

15 October 2017

Tricksy business: transcriptome analysis reveals the involvement of thioredoxin A in redox homeostasis, oxidative stress, sulfur metabolism, and cellular differentiation in Bacillus subtilis (English)

1 reference

Europe PubMed Central

PMC publication ID

15 October 2017

0 references

Bacillus subtilis

1 reference

based on heuristic

inferred from title

Wiep Klaas Smits

1

1 reference

Europe PubMed Central

PMC publication ID

15 October 2017

author name string

Jean-Yves F Dubois

2

1 reference

Europe PubMed Central

PMC publication ID

15 October 2017

Sierd Bron

3

1 reference

Europe PubMed Central

PMC publication ID

15 October 2017

Jan Maarten van Dijl

4

1 reference

Europe PubMed Central

PMC publication ID

15 October 2017

Oscar P Kuipers

5

1 reference

Europe PubMed Central

PMC publication ID

15 October 2017

publication date

1 June 2005

1 reference

Europe PubMed Central

PMC publication ID

15 October 2017

Journal of Bacteriology

1 reference

Europe PubMed Central

PMC publication ID

15 October 2017

187

1 reference

Europe PubMed Central

PMC publication ID

15 October 2017

12

1 reference

Europe PubMed Central

PMC publication ID

15 October 2017

3921-3930

1 reference

Europe PubMed Central

PMC publication ID

15 October 2017

Protein thiol modifications visualized in vivo

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1151711

5 June 2018

Bacillus subtilis StoA Is a thiol-disulfide oxidoreductase important for spore cortex synthesis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1151711

5 June 2018

spoIVH (ykvV), a requisite cortex formation gene, is expressed in both sporulating compartments of Bacillus subtilis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1151711

5 June 2018

Three different systems participate in L-cystine uptake in Bacillus subtilis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1151711

5 June 2018

Genome2D: a visualization tool for the rapid analysis of bacterial transcriptome data

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1151711

5 June 2018

New thioredoxin targets in the unicellular photosynthetic eukaryote Chlamydomonas reinhardtii

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1151711

5 June 2018

Zinc is a key factor in controlling alternation of two types of L31 protein in the Bacillus subtilis ribosome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1151711

5 June 2018

Proteomic analysis of thioredoxin-targeted proteins in Escherichia coli

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1151711

5 June 2018

Thioredoxin links redox to the regulation of fundamental processes of plant mitochondria

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1151711

5 June 2018

Target proteins of the cytosolic thioredoxins in Arabidopsis thaliana.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1151711

5 June 2018

Investigating mitochondrial redox potential with redox-sensitive green fluorescent protein indicators

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1151711

5 June 2018

Thioredoxin-linked processes in cyanobacteria are as numerous as in chloroplasts, but targets are different

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1151711

5 June 2018

Spx-dependent global transcriptional control is induced by thiol-specific oxidative stress in Bacillus subtilis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1151711

5 June 2018

Thioredoxin-mediated redox control of the transcription factor Sp1 and regulation of the thioredoxin gene promoter.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1151711

5 June 2018

Glutathione protects Lactococcus lactis against oxidative stress.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1151711

5 June 2018

FATE OF TRANSFORMING DEOXYRIBONUCLEIC ACID IN BACILLUS SUBTILIS.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1151711

5 June 2018

Essential Bacillus subtilis genes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1151711

5 June 2018

A regulatory protein that interferes with activator-stimulated transcription in bacteria

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1151711

5 June 2018

Global characterization of disulfide stress in Bacillus subtilis.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1151711

5 June 2018

Proteomics gives insight into the regulatory function of chloroplast thioredoxins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1151711

5 June 2018

Improving the predictive value of the competence transcription factor (ComK) binding site in Bacillus subtilis using a genomic approach

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1151711

5 June 2018

Functional analysis of the Bacillus subtilis Zur regulon.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1151711

5 June 2018

Global analysis of the Bacillus subtilis Fur regulon and the iron starvation stimulon

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1151711

5 June 2018

A peroxide-induced zinc uptake system plays an important role in protection against oxidative stress in Bacillus subtilis.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1151711

5 June 2018

Identification of Bacillus subtilis CysL, a regulator of the cysJI operon, which encodes sulfite reductase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1151711

5 June 2018

Regulation of the Bacillus subtilis fur and perR genes by PerR: not all members of the PerR regulon are peroxide inducible

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1151711

5 June 2018

Bacillus subtilis functional genomics: global characterization of the stringent response by proteome and transcriptome analysis.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1151711

5 June 2018

Redox reactions of regulatory proteins: do kinetics promote specificity?

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1151711

5 June 2018

Extracting biological information from DNA arrays: an unexpected link between arginine and methionine metabolism in Bacillus subtilis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1151711

5 June 2018

OhrR is a repressor of ohrA, a key organic hydroperoxide resistance determinant in Bacillus subtilis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1151711

5 June 2018

Physiological functions of thioredoxin and thioredoxin reductase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1151711

5 June 2018

The Bacillus subtilis cysP gene encodes a novel sulphate permease related to the inorganic phosphate transporter (Pit) family

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1151711

5 June 2018

Bacillus subtilis yckG and yckF encode two key enzymes of the ribulose monophosphate pathway used by methylotrophs, and yckH is required for their expression

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1151711

5 June 2018

In vitro and in vivo oxidation of methionine residues in small, acid-soluble spore proteins from Bacillus species

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1151711

5 June 2018

Thioredoxin is an essential protein induced by multiple stresses in Bacillus subtilis.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1151711

5 June 2018

The complete genome sequence of the gram-positive bacterium Bacillus subtilis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1151711

5 June 2018

The role of the thioredoxin and glutaredoxin pathways in reducing protein disulfide bonds in the Escherichia coli cytoplasm.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1151711

5 June 2018

L-cysteine biosynthesis in Bacillus subtilis: identification, sequencing, and functional characterization of the gene coding for phosphoadenylylsulfate sulfotransferase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1151711

5 June 2018

The Bacillus subtilis genes for ribonucleotide reductase are similar to the genes for the second class I NrdE/NrdF enzymes of Enterobacteriaceae

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1151711

5 June 2018

Overproduction, isolation, and DNA-binding characteristics of Xre, the repressor protein from the Bacillus subtilis defective prophage PBSX.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1151711

5 June 2018

Genetic control of bacterial suicide: regulation of the induction of PBSX in Bacillus subtilis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1151711

5 June 2018

Coordinate regulation of Bacillus subtilis peroxide stress genes by hydrogen peroxide and metal ions

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1151711

5 June 2018

Thioredoxin and related proteins in procaryotes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1151711

5 June 2018

Isolation of superoxide dismutase mutants in Escherichia coli: is superoxide dismutase necessary for aerobic life?

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1151711

5 June 2018

The Bacillus subtilis spoIIG operon encodes both sigma E and a gene necessary for sigma E activation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1151711

5 June 2018

Characterization of PBSX, a defective prophage of Bacillus subtilis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1151711

5 June 2018

Thioredoxin deficiency in yeast prolongs S phase and shortens the G1 interval of the cell cycle

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1151711

5 June 2018

The SOB system of Bacillus subtilis: a global regulon involved in DNA repair and differentiation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1151711

5 June 2018

Redox-sensitive transcriptional control by a thiol/disulphide switch in the global regulator, Spx.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1151711

17 August 2018

Imaging dynamic redox changes in mammalian cells with green fluorescent protein indicators

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1151711

17 August 2018

Transcriptome and proteome analysis of Bacillus subtilis gene expression in response to superoxide and peroxide stress.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1151711

17 August 2018

Characterization and reconstitution of a 4Fe-4S adenylyl sulfate/phosphoadenylyl sulfate reductase from Bacillus subtilis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1151711

17 August 2018

Unraveling thioredoxin-linked metabolic processes of cereal starchy endosperm using proteomics

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1151711

17 August 2018

Cannibalism by sporulating bacteria

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1151711

17 August 2018

A covalent linkage between the gene 5 DNA polymerase of bacteriophage T7 and Escherichia coli thioredoxin, the processivity factor: fate of thioredoxin during DNA synthesis.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1151711

17 August 2018

Real-time kinetics of the interaction between the two subunits, Escherichia coli thioredoxin and gene 5 protein of phage T7 DNA polymerase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1151711

17 August 2018

Defining the disulphide stress response in Streptomyces coelicolor A3(2): identification of the sigmaR regulon.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1151711

17 August 2018

Loss-of-function mutations in yjbD result in ClpX- and ClpP-independent competence development of Bacillus subtilis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1151711

17 August 2018

Functional analysis of the Bacillus subtilis cysK and cysJI genes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1151711

17 August 2018

Expression and purification of the Bacillus subtilis thioredoxin superfamily protein YkvV

1 reference

https://pubmed.ncbi.nlm.nih.gov/15937154

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

comK encodes the competence transcription factor, the key regulatory protein for competence development in Bacillus subtilis

1 reference

https://pubmed.ncbi.nlm.nih.gov/15937154

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The mechanism of the auxotrophy for sulfur-containing amino acids imposed upon Escherichia coli by superoxide

1 reference

https://pubmed.ncbi.nlm.nih.gov/15937154

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A xylose-inducible Bacillus subtilis integration vector and its application

1 reference

https://pubmed.ncbi.nlm.nih.gov/15937154

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Superoxide imposes leakage of sulfite from Escherichia coli

1 reference

https://pubmed.ncbi.nlm.nih.gov/15937154

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Why superoxide imposes an aromatic amino acid auxotrophy on Escherichia coli. The transketolase connection

1 reference

https://pubmed.ncbi.nlm.nih.gov/15937154

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1128/JB.187.12.3921-3930.2005

1 reference

Europe PubMed Central

PMC publication ID

15 October 2017

PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

15 October 2017

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

15 October 2017

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