(Q42090811)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21194489%20AND%20SRC:MED&resulttype=core&format=json

19 January 2020

title

Metabolomic correlation-network modules in Arabidopsis based on a graph-clustering approach (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21194489%20AND%20SRC:MED&resulttype=core&format=json

19 January 2020

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(RS)-pyroglutamic acid

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inferred from

reverse claim

alpha,alpha-trehalose

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2-hydroxyglutaric acid

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D-fructose-6-phosphate (open form)

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inositol monophosphate

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S-adenosyl-L-methionine

1 reference

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alpha-ketoglutaric acid

1 reference

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5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21194489%20AND%20SRC:MED&resulttype=core&format=json

19 January 2020

Atsushi Fukushima

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21194489%20AND%20SRC:MED&resulttype=core&format=json

19 January 2020

Miyako Kusano

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21194489%20AND%20SRC:MED&resulttype=core&format=json

19 January 2020

Henning Redestig

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21194489%20AND%20SRC:MED&resulttype=core&format=json

19 January 2020

author name string

Masanori Arita

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21194489%20AND%20SRC:MED&resulttype=core&format=json

19 January 2020

publication date

1 January 2011

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21194489%20AND%20SRC:MED&resulttype=core&format=json

full work available at URL

19 January 2020

https://bmcsystbiol.biomedcentral.com/track/pdf/10.1186/1752-0509-5-1

1 reference

19 March 2024

https://api.unpaywall.org/v2/10.1186/1752-0509-5-1?email=unpaywall_01@example.com

published in

BMC Systems Biology

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21194489%20AND%20SRC:MED&resulttype=core&format=json

19 January 2020

volume

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21194489%20AND%20SRC:MED&resulttype=core&format=json

19 January 2020

page(s)

1

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21194489%20AND%20SRC:MED&resulttype=core&format=json

19 January 2020

1 reference

19 March 2024

https://api.unpaywall.org/v2/10.1186/1752-0509-5-1?email=unpaywall_01@example.com

access restriction status

open access

1 reference

based on heuristic

inferred from online access status

exact match

https://scigraph.springernature.com/pub.10.1186/1752-0509-5-1

0 references

cites work

From 'differential expression' to 'differential networking' - identification of dysfunctional regulatory networks in diseases

1 reference

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Consolidating metabolite identifiers to enable contextual and multi-platform metabolomics data analysis

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3030539

Metabolic networks: how to identify key components in the regulation of metabolism and growth

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3030539

KEGG for representation and analysis of molecular networks involving diseases and drugs

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3030539

Arabidopsis gene co-expression network and its functional modules.

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3030539

Integrated omics approaches in plant systems biology

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3030539

Stability of metabolic correlations under changing environmental conditions in Escherichia coli--a systems approach

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3030539

Metabolomics for functional genomics, systems biology, and biotechnology

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3030539

Characterization of the ABA-regulated global responses to dehydration in Arabidopsis by metabolomics

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3030539

Regulon organization of Arabidopsis

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3030539

fdrtool: a versatile R package for estimating local and tail area-based false discovery rates

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3030539

Plant systems biology comes of age.

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3030539

Decoding genes with coexpression networks and metabolomics - 'majority report by precogs'.

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3030539

Unbiased characterization of genotype-dependent metabolic regulations by metabolomic approach in Arabidopsis thaliana

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3030539

Construction, visualisation, and clustering of transcription networks from microarray expression data

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3030539

An Arabidopsis gene network based on the graphical Gaussian model.

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3030539

Consistency analysis of metabolic correlation networks

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3030539

pcaMethods--a bioconductor package providing PCA methods for incomplete data

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3030539

Review: on the analysis and interpretation of correlations in metabolomic data

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3030539

Predictive metabolite profiling applying hierarchical multivariate curve resolution to GC-MS data--a potential tool for multi-parametric diagnosis

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3030539

Development and implementation of an algorithm for detection of protein complexes in large interaction networks

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3030539

Plant metabolomics: from holistic hope, to hype, to hot topic.

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3030539

Biomarker metabolites capturing the metabolite variance present in a rice plant developmental period

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3030539

Integrating genomics and metabolomics for engineering plant metabolic pathways

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3030539

GC-MS libraries for the rapid identification of metabolites in complex biological samples

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3030539

GMD@CSB.DB: the Golm Metabolome Database

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3030539

Rank products: a simple, yet powerful, new method to detect differentially regulated genes in replicated microarray experiments

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3030539

Discovery of meaningful associations in genomic data using partial correlation coefficients

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3030539

Differential metabolic networks unravel the effects of silent plant phenotypes

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3030539

Network biology: understanding the cell's functional organization

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3030539

Mutation rate and novel tt mutants of Arabidopsis thaliana induced by carbon ions.

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3030539

The mutual information: detecting and evaluating dependencies between variables.

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3030539

Metabolic profiling allows comprehensive phenotyping of genetically or environmentally modified plant systems

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3030539

Comparative metabolomics charts the impact of genotype-dependent methionine accumulation in Arabidopsis thaliana.

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3030539

SVD-based anatomy of gene expressions for correlation analysis in Arabidopsis thaliana

17 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3030539

Comprehensive flavonol profiling and transcriptome coexpression analysis leading to decoding gene-metabolite correlations in Arabidopsis

17 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3030539

Potential of metabolomics as a functional genomics tool.

17 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3030539

Observing and interpreting correlations in metabolomic networks.

17 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3030539

Isolation of an Arabidopsis thaliana Mutant, mto1, That Overaccumulates Soluble Methionine (Temporal and Spatial Patterns of Soluble Methionine Accumulation).

17 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3030539

Visualizing plant metabolomic correlation networks using clique-metabolite matrices.

17 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3030539

Can Arabidopsis make complex alkaloids?

17 August 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21194489

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Metabolomic Screening Applied to Rice FOX Arabidopsis Lines Leads to the Identification of a Gene-Changing Nitrogen Metabolism

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21194489

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/1752-0509-5-1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21194489%20AND%20SRC:MED&resulttype=core&format=json

journals/bmcsb/FukushimaKRAS11

19 January 2020

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

Dimensions Publication ID

28 January 2021

0 references

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21194489%20AND%20SRC:MED&resulttype=core&format=json

19 January 2020

PubMed publication ID

21194489

1 reference