Home
Random
Nearby
Log in
Settings
Donate
About Wikidata
Disclaimers
Search
(Q42132014)
Watch
English
A novel abundance-based algorithm for binning metagenomic sequences using l-tuples.
scientific article published on March 2011
In more languages
edit
Statements
instance of
scholarly article
1 reference
stated in
Europe PubMed Central
PMC publication ID
3123841
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21385052%20AND%20SRC:MED&resulttype=core&format=json
retrieved
24 January 2020
title
A novel abundance-based algorithm for binning metagenomic sequences using l-tuples
(English)
1 reference
stated in
Europe PubMed Central
PMC publication ID
3123841
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21385052%20AND%20SRC:MED&resulttype=core&format=json
retrieved
24 January 2020
main subject
metagenomics
1 reference
based on heuristic
inferred from title
author
Yu-Wei Wu
series ordinal
1
1 reference
stated in
Europe PubMed Central
PMC publication ID
3123841
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21385052%20AND%20SRC:MED&resulttype=core&format=json
retrieved
24 January 2020
author name string
Yuzhen Ye
series ordinal
2
1 reference
stated in
Europe PubMed Central
PMC publication ID
3123841
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21385052%20AND%20SRC:MED&resulttype=core&format=json
retrieved
24 January 2020
publication date
1 March 2011
1 reference
stated in
Europe PubMed Central
PMC publication ID
3123841
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21385052%20AND%20SRC:MED&resulttype=core&format=json
retrieved
24 January 2020
published in
Journal of Computational Biology
1 reference
stated in
Europe PubMed Central
PMC publication ID
3123841
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21385052%20AND%20SRC:MED&resulttype=core&format=json
retrieved
24 January 2020
volume
18
1 reference
stated in
Europe PubMed Central
PMC publication ID
3123841
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21385052%20AND%20SRC:MED&resulttype=core&format=json
retrieved
24 January 2020
issue
3
1 reference
stated in
Europe PubMed Central
PMC publication ID
3123841
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21385052%20AND%20SRC:MED&resulttype=core&format=json
retrieved
24 January 2020
page(s)
523-534
1 reference
stated in
Europe PubMed Central
PMC publication ID
3123841
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21385052%20AND%20SRC:MED&resulttype=core&format=json
retrieved
24 January 2020
cites work
TACOA: taxonomic classification of environmental genomic fragments using a kernelized nearest neighbor approach
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3123841
retrieved
29 May 2018
Barcodes for genomes and applications
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3123841
retrieved
29 May 2018
A core gut microbiome in obese and lean twins
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3123841
retrieved
29 May 2018
A simple, fast, and accurate method of phylogenomic inference
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3123841
retrieved
29 May 2018
Taxonomic distribution of large DNA viruses in the sea
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3123841
retrieved
29 May 2018
Functional metagenomic profiling of nine biomes
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3123841
retrieved
29 May 2018
Microbial ecology of four coral atolls in the Northern Line Islands.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3123841
retrieved
29 May 2018
Phylogenetic classification of short environmental DNA fragments
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3123841
retrieved
29 May 2018
Figaro: a novel statistical method for vector sequence removal
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3123841
retrieved
29 May 2018
DNA sequencing: bench to bedside and beyond
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3123841
retrieved
29 May 2018
Accuracy and quality of massively parallel DNA pyrosequencing
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3123841
retrieved
29 May 2018
A detailed analysis of 16S ribosomal RNA gene segments for the diagnosis of pathogenic bacteria
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3123841
retrieved
29 May 2018
Quantitative Phylogenetic Assessment of Microbial Communities in Diverse Environments
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3123841
retrieved
29 May 2018
MEGAN analysis of metagenomic data
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3123841
retrieved
29 May 2018
An obesity-associated gut microbiome with increased capacity for energy harvest
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3123841
retrieved
29 May 2018
Whole-genome re-sequencing
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3123841
retrieved
29 May 2018
Symbiosis insights through metagenomic analysis of a microbial consortium
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3123841
retrieved
29 May 2018
Toward Automatic Reconstruction of a Highly Resolved Tree of Life
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3123841
retrieved
29 May 2018
Pfam: clans, web tools and services
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3123841
retrieved
29 May 2018
Environments shape the nucleotide composition of genomes
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3123841
retrieved
29 May 2018
Genome sequencing in microfabricated high-density picolitre reactors
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3123841
retrieved
29 May 2018
Comparative metagenomics of microbial communities
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3123841
retrieved
29 May 2018
Comparative genomic structure of prokaryotes
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3123841
retrieved
29 May 2018
TETRA: a web-service and a stand-alone program for the analysis and comparison of tetranucleotide usage patterns in DNA sequences
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3123841
retrieved
29 May 2018
Metagenomics: from acid mine to shining sea.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3123841
retrieved
29 May 2018
Community structure and metabolism through reconstruction of microbial genomes from the environment
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3123841
retrieved
29 May 2018
A Simple, Fast, and Accurate Algorithm to Estimate Large Phylogenies by Maximum Likelihood
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3123841
retrieved
29 May 2018
Estimating the repeat structure and length of DNA sequences using L-tuples
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3123841
retrieved
29 May 2018
TREE-PUZZLE: maximum likelihood phylogenetic analysis using quartets and parallel computing
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3123841
retrieved
29 May 2018
Genomic mapping by fingerprinting random clones: a mathematical analysis
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3123841
retrieved
29 May 2018
Phymm and PhymmBL: metagenomic phylogenetic classification with interpolated Markov models
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3123841
retrieved
17 August 2018
Identifiers
DOI
10.1089/CMB.2010.0245
1 reference
stated in
Europe PubMed Central
PMC publication ID
3123841
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21385052%20AND%20SRC:MED&resulttype=core&format=json
retrieved
24 January 2020
DBLP publication ID
journals/jcb/WuY11
1 reference
stated in
DBLP Dataset 2021-01-02
retrieved
28 January 2021
PMC publication ID
3123841
1 reference
stated in
Europe PubMed Central
PMC publication ID
3123841
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21385052%20AND%20SRC:MED&resulttype=core&format=json
retrieved
24 January 2020
PubMed publication ID
21385052
1 reference
stated in
Europe PubMed Central
PMC publication ID
3123841
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21385052%20AND%20SRC:MED&resulttype=core&format=json
retrieved
24 January 2020
ResearchGate publication ID
50347217
0 references
Sitelinks
Wikipedia
(0 entries)
edit
Wikibooks
(0 entries)
edit
Wikinews
(0 entries)
edit
Wikiquote
(0 entries)
edit
Wikisource
(0 entries)
edit
Wikiversity
(0 entries)
edit
Wikivoyage
(0 entries)
edit
Wiktionary
(0 entries)
edit
Multilingual sites
(0 entries)
edit