(Q42150731)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17617643%20AND%20SRC:MED&resulttype=core&format=json

1 January 2020

title

Probing key DNA contacts in AraR-mediated transcriptional repression of the Bacillus subtilis arabinose regulon (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17617643%20AND%20SRC:MED&resulttype=core&format=json

1 January 2020

0 references

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17617643%20AND%20SRC:MED&resulttype=core&format=json

1 January 2020

Luís Jaime Mota

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17617643%20AND%20SRC:MED&resulttype=core&format=json

1 January 2020

Cláudio M. Soares

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17617643%20AND%20SRC:MED&resulttype=core&format=json

1 January 2020

Isabel de Sá-Nogueira

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17617643%20AND%20SRC:MED&resulttype=core&format=json

1 January 2020

author name string

Irina Saraiva Franco

1

1 reference

17 October 2017

Luís Jaime Mota

2

1 reference

17 October 2017

Cláudio Manuel Soares

3

1 reference

17 October 2017

Isabel de Sá-Nogueira

4

1 reference

17 October 2017

7 July 2007

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17617643%20AND%20SRC:MED&resulttype=core&format=json

1 January 2020

published in

Nucleic Acids Research

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17617643%20AND%20SRC:MED&resulttype=core&format=json

1 January 2020

volume

35

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17617643%20AND%20SRC:MED&resulttype=core&format=json

1 January 2020

page(s)

4755-4766

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17617643%20AND%20SRC:MED&resulttype=core&format=json

1 January 2020

issue

14

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17617643%20AND%20SRC:MED&resulttype=core&format=json

describes a project that uses

1 January 2020

ImageQuant

1 reference

11 June 2022

https://www.ebi.ac.uk/europepmc/webservices/rest/PMC1950556/fullTextXML

based on heuristic

inferred from PubMed Central ID database lookup

cites work

Functional domains of the Bacillus subtilis transcription factor AraR and identification of amino acids important for nucleoprotein complex assembly and effector binding.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1950556

WebLogo: A Sequence Logo Generator

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1950556

Transcriptional regulation of genes encoding arabinan-degrading enzymes in Bacillus subtilis.

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1950556

PlmA, a new member of the GntR family, has plasmid maintenance functions in Anabaena sp. strain PCC 7120.

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1950556

Functional Dissection of the Bacillus subtilis pur Operator Site

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1950556

CDART: protein homology by domain architecture

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1950556

Identification of two myo-inositol transporter genes of Bacillus subtilis

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1950556

Subdivision of the helix-turn-helix GntR family of bacterial regulators in the FadR, HutC, MocR, and YtrA subfamilies

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1950556

Amino acid-base interactions: a three-dimensional analysis of protein-DNA interactions at an atomic level

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1950556

Control of the arabinose regulon in Bacillus subtilis by AraR in vivo: crucial roles of operators, cooperativity, and DNA looping

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1950556

The structural basis of acyl coenzyme A-dependent regulation of the transcription factor FadR

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1950556

The FadR.DNA complex. Transcriptional control of fatty acid metabolism in Escherichia coli

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1950556

Crystal structure of FadR, a fatty acid-responsive transcription factor with a novel acyl coenzyme A-binding fold

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1950556

29 May 2018

Winged helix proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1950556

Mode of action of AraR, the key regulator of L-arabinose metabolism in Bacillus subtilis

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1950556

The Bacillus subtilis AraE protein displays a broad substrate specificity for several different sugars.

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1950556

Cloning, functional analysis, and transcriptional regulation of the Bacillus subtilis araE gene involved in L-arabinose utilization

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1950556

The Bacillus subtilis L-arabinose (ara) operon: nucleotide sequence, genetic organization and expression

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1950556

Negative regulation of L-arabinose metabolism in Bacillus subtilis: characterization of the araR (araC) gene

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1950556

Plasmids for ectopic integration in Bacillus subtilis.

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1950556

Missense mutations in the Bacillus subtilis gnt repressor that diminish operator binding ability

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1950556

Co-crystal structure of the HNF-3/fork head DNA-recognition motif resembles histone H5

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1950556

Lac repressor-operator interaction. I. Equilibrium studies.

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1950556

Use of T7 RNA polymerase to direct expression of cloned genes

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1950556

A new family of bacterial regulatory proteins

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1950556

A family of bacterial regulators homologous to Gal and Lac repressors.

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1950556

Protein-DNA interactions: amino acid conservation and the effects of mutations on binding specificity.

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1950556

Transcriptional regulation of pentose utilisation systems in the Bacillus/Clostridium group of bacteria

17 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1950556

Characterization of two sucrase activites in Bacillus subtilis marburg

17 August 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/17617643

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Characterization of the Fatty Acid-responsive Transcription Factor FadR

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/17617643

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1093/NAR/GKM509

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17617643%20AND%20SRC:MED&resulttype=core&format=json

1 January 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17617643%20AND%20SRC:MED&resulttype=core&format=json

1 January 2020

1 reference