(Q42183781)

18 October 2017

Water-mediated protein-DNA interactions: the relationship of thermodynamics to structural detail (English)

1 reference

18 October 2017

0 references

C J Morton

1

1 reference

PMCID

2143271

18 October 2017

J E Ladbury

series ordinal

2

1 reference

18 October 2017

1 October 1996

1 reference

18 October 2017

1 reference

18 October 2017

5

1 reference

18 October 2017

2115-2118

1 reference

18 October 2017

10

1 reference

Counting the calories to stay in the groove.

18 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143271

Refined solution structures of the Escherichia coli trp holo- and aporepressor

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143271

Mutagenesis supports water mediated recognition in the trp repressor-operator system.

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143271

Coupling of local folding to site-specific binding of proteins to DNA

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143271

Tandem binding in crystals of a trp repressor/operator half-site complex

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143271

A thermodynamic study of the trp repressor-operator interaction

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143271

Significant discrepancies between van't Hoff and calorimetric enthalpies

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143271

The interpretation of protein structures: Estimation of static accessibility

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143271

Environment and exposure to solvent of protein atoms. Lysozyme and insulin

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143271

Crystal structure of trp repressor/operator complex at atomic resolution

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143271

Role of the hydrophobic effect in stability of site-specific protein-DNA complexes

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143271

The solution structures of Escherichia coli trp repressor and trp aporepressor at an intermediate resolution.

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143271

Protein folding and association: insights from the interfacial and thermodynamic properties of hydrocarbons

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143271

Solid model compounds and the thermodynamics of protein unfolding

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143271

Crystal structure of the met repressor-operator complex at 2.8 A resolution reveals DNA recognition by beta-strands

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143271

Heat capacity and entropy changes in processes involving proteins

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143271

Contribution to the thermodynamics of protein folding from the reduction in water-accessible nonpolar surface area.

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143271

Determinants of repressor/operator recognition from the structure of the trp operator binding site.

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143271

The structure of trp pseudorepressor at 1.65A shows why indole propionate acts as a trp 'inducer'.

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143271

Sequence-specific NMR assignments of the trp repressor from Escherichia coli using three-dimensional 15N/1H heteronuclear techniques

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143271

Similarity of met and trp repressors.

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143271

Thermodynamic evaluation of binding interactions in the methionine repressor system of Escherichia coli using isothermal titration calorimetry.

17 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143271

Specific purine N7-nitrogens are critical for high affinity binding by the trp repressor.

17 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143271

Calculation of molecular volumes and areas for structures of known geometry.

17 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143271

Common features of protein unfolding and dissolution of hydrophobic compounds

17 August 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/8897612

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Heat capacity changes for protein-peptide interactions in the ribonuclease S system

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/8897612

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

1 reference

https://pubmed.ncbi.nlm.nih.gov/8897612

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1002/PRO.5560051018

1 reference

18 October 2017

1 reference

18 October 2017

1 reference

PMCID

2143271