(Q42370332)

English

Double-stranded DNA-templated cleavage of oligonucleotides containing a P3'->N5' linkage triggered by triplex formation: the effects of chemical modifications and remarkable enhancement in reactivity

scientific article published on 8 July 2010

In more languages

Statements

scholarly article

1 reference

Europe PubMed Central

PMC publication ID

28 October 2017

Double-stranded DNA-templated cleavage of oligonucleotides containing a P3'->N5' linkage triggered by triplex formation: the effects of chemical modifications and remarkable enhancement in reactivity (English)

1 reference

Europe PubMed Central

PMC publication ID

28 October 2017

author name string

Kosuke Ramon Ito

1

1 reference

Europe PubMed Central

PMC publication ID

28 October 2017

Tetsuya Kodama

2

1 reference

Europe PubMed Central

PMC publication ID

28 October 2017

Masaharu Tomizu

3

1 reference

Europe PubMed Central

PMC publication ID

28 October 2017

Yoshinori Negoro

4

1 reference

Europe PubMed Central

PMC publication ID

28 October 2017

Ayako Orita

5

1 reference

Europe PubMed Central

PMC publication ID

28 October 2017

Tomohisa Osaki

6

1 reference

Europe PubMed Central

PMC publication ID

28 October 2017

Noritsugu Hosoki

7

1 reference

Europe PubMed Central

PMC publication ID

28 October 2017

Takaya Tanaka

8

1 reference

Europe PubMed Central

PMC publication ID

28 October 2017

Takeshi Imanishi

9

1 reference

Europe PubMed Central

PMC publication ID

28 October 2017

Satoshi Obika

10

1 reference

Europe PubMed Central

PMC publication ID

28 October 2017

language of work or name

1 reference

based on heuristic

inferred from title

publication date

8 July 2010

1 reference

Europe PubMed Central

PMC publication ID

28 October 2017

Nucleic Acids Research

1 reference

Europe PubMed Central

PMC publication ID

28 October 2017

38

1 reference

Europe PubMed Central

PMC publication ID

28 October 2017

20

1 reference

Europe PubMed Central

PMC publication ID

28 October 2017

7332-7342

1 reference

Europe PubMed Central

PMC publication ID

28 October 2017

copyright license

Creative Commons Attribution-NonCommercial 2.5 Generic

4 October 2016

1 reference

April 2022 Public Data File from Crossref

copyright status

0 references

Streamlining hit discovery and optimization with a yoctoliter scale DNA reactor

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2978371

29 May 2018

Efficient nucleic acid detection by templated reductive quencher release

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2978371

29 May 2018

7-Azidomethoxy-coumarins as profluorophores for templated nucleic acid detection

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2978371

29 May 2018

Organometallic activation of a fluorogen for templated nucleic acid detection

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2978371

29 May 2018

Facile SNP detection using bifunctional, cross-linking oligonucleotide probes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2978371

29 May 2018

Acid-mediated cleavage of oligonucleotide P3' --> N5' phosphoramidates triggered by sequence-specific triplex formation.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2978371

29 May 2018

Flow cytometric detection of specific RNAs in native human cells with quenched autoligating FRET probes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2978371

29 May 2018

Templated metal catalysis for single nucleotide specific DNA sequence detection

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2978371

29 May 2018

Four base recognition by triplex-forming oligonucleotides at physiological pH.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2978371

29 May 2018

Improved nucleic acid triggered probe activation through the use of a 5-thiomethyluracil peptide nucleic acid building block.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2978371

29 May 2018

Nucleic acid-triggered fluorescent probe activation by the Staudinger reaction

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2978371

29 May 2018

Solution structure of a dsDNA:LNA triplex.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2978371

29 May 2018

DNA-templated organic synthesis and selection of a library of macrocycles

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2978371

29 May 2018

Synthesis, incorporation into triplex-forming oligonucleotide, and binding properties of a novel 2'-deoxy-C-nucleoside featuring a 6-(thiazolyl-5)benzimidazole nucleobase.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2978371

29 May 2018

The generality of DNA-templated synthesis as a basis for evolving non-natural small molecules

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2978371

29 May 2018

2'-O,4'-C-Methylene bridged nucleic acid (2',4'-BNA): synthesis and triplex-forming properties

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2978371

29 May 2018

Prediction of the stability of DNA triplexes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2978371

29 May 2018

Intramolecular and divalent metal ion catalysis. Hydrolytic mechanism of O-phenyl N-(glycyl)phosphoramidate

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2978371

29 May 2018

Thermodynamic characterization of the stability and the melting behavior of a DNA triplex: a spectroscopic and calorimetric study

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2978371

29 May 2018

Influence of pH on the equilibrium association constants for oligodeoxyribonucleotide-directed triple helix formation at single DNA sites

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2978371

29 May 2018

Nucleic acid templated reactions: consequences of probe reactivity and readout strategy for amplified signaling and sequence selectivity.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2978371

17 August 2018

Reduction-triggered red fluorescent probes for dual-color detection of oligonucleotide sequences

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2978371

17 August 2018

Target-catalyzed transfer reactions for the amplified detection of RNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2978371

17 August 2018

Fluorescence-based detection of single nucleotide permutation in DNA via catalytically templated reaction

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2978371

17 August 2018

Rapid DNA chemical ligation for amplification of RNA and DNA signal.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2978371

17 August 2018

Single nucleotide specific detection of DNA by native chemical ligation of fluorescence labeled PNA-probes.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2978371

17 August 2018

Reducing product inhibition in DNA-template-controlled ligation reactions.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2978371

17 August 2018

Stable recognition of TA interruptions by triplex forming oligonucleotides containing a novel nucleoside

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2978371

17 August 2018

Destabilizing universal linkers for signal amplification in self-ligating probes for RNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2978371

17 August 2018

Sequence and pH effects of LNA-containing triple helix-forming oligonucleotides: physical chemistry, biochemistry, and modeling studies

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2978371

17 August 2018

Stable oligonucleotide-directed triplex formation at target sites with CG interruptions: strong sequence-specific recognition by 2',4'-bridged nucleic-acid-containing 2-pyridones under physiological conditions.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2978371

17 August 2018

Hydrolytic reactions of diribonucleoside 3',5'-(3'-N-phosphoramidates): kinetics and mechanisms for the P-O and P-N bond cleavage of 3'-amino-3'-deoxyuridylyl-3',5'-uridine

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2978371

17 August 2018

Incorporation of a novel nucleobase allows stable oligonucleotide-directed triple helix formation at the target sequence containing a purine.pyrimidine interruption

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2978371

17 August 2018

Quencher as leaving group: efficient detection of DNA-joining reactions.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2978371

17 August 2018

A simplified and efficient route to 2'-O, 4'-C-methylene-linked bicyclic ribonucleosides (locked nucleic acid).

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2978371

17 August 2018

DNA-Catalyzed Transfer of a Reporter Group

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2978371

1 December 2018

As Fast and Selective as Enzymatic Ligations: Unpaired Nucleobases Increase the Selectivity of DNA-Controlled Native Chemical PNA Ligation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2978371

1 December 2018

DNA-Templated Metal Catalysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2978371

1 December 2018

Selective recognition of a C-G base-pair in the parallel DNA triple-helical binding motif

1 reference

https://pubmed.ncbi.nlm.nih.gov/20615902

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Nonenzymatic autoligation in direct three-color detection of RNA and DNA point mutations

1 reference

https://pubmed.ncbi.nlm.nih.gov/20615902

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Multistep small-molecule synthesis programmed by DNA templates

1 reference

https://pubmed.ncbi.nlm.nih.gov/20615902

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Promotion of stable triplex formation by partial incorporation of 2',5'-phosphodiester linkages into triplex-forming oligonucleotides

1 reference

https://pubmed.ncbi.nlm.nih.gov/20615902

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Template-directed DNA photoligation in rapid and selective detection of RNA point mutations

1 reference

https://pubmed.ncbi.nlm.nih.gov/20615902

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

SNP genotyping by using photochemical ligation

1 reference

https://pubmed.ncbi.nlm.nih.gov/20615902

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Double-stranded DNA-templated oligonucleotide digestion triggered by triplex formation

1 reference

https://pubmed.ncbi.nlm.nih.gov/20615902

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A 2′,4′-Bridged Nucleic Acid Containing 2-Pyridone as a Nucleobase: Efficient Recognition of a C⋅G Interruption by Triplex Formation with a Pyrimidine Motif

1 reference

https://pubmed.ncbi.nlm.nih.gov/20615902

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Study of conformational changes induced on substituting NH for O at C(51) of thymidine nucleosides and nucleotides

1 reference

https://pubmed.ncbi.nlm.nih.gov/20615902

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1093/NAR/GKQ600

1 reference

Europe PubMed Central

PMC publication ID

28 October 2017

PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

28 October 2017

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

28 October 2017

ResearchGate publication ID

0 references

Sitelinks

Wikipedia(0 entries)

Wikibooks(0 entries)

Wikinews(0 entries)

Wikiquote(0 entries)

Wikisource(0 entries)

Wikiversity(0 entries)

Wikivoyage(0 entries)

Wiktionary(0 entries)

Multilingual sites(0 entries)

Retrieved from "https://www.wikidata.org/w/index.php?title=Q42370332&oldid=1943072594"