(Q42551114)

English

Quantitative PCR method for sensitive detection of ruminant fecal pollution in freshwater and evaluation of this method in alpine karstic regions.

scientific article published on August 2006

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scholarly article

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16885315%20AND%20SRC:MED&resulttype=core&format=json

28 December 2019

Quantitative PCR method for sensitive detection of ruminant fecal pollution in freshwater and evaluation of this method in alpine karstic regions (English)

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16885315%20AND%20SRC:MED&resulttype=core&format=json

28 December 2019

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Georg H Reischer

1

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16885315%20AND%20SRC:MED&resulttype=core&format=json

28 December 2019

4

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16885315%20AND%20SRC:MED&resulttype=core&format=json

28 December 2019

Andreas H. Farnleitner

5

1 reference

Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16885315%20AND%20SRC:MED&resulttype=core&format=json

28 December 2019

author name string

David C Kasper

2

1 reference

Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16885315%20AND%20SRC:MED&resulttype=core&format=json

28 December 2019

Ralf Steinborn

3

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16885315%20AND%20SRC:MED&resulttype=core&format=json

28 December 2019

language of work or name

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publication date

1 August 2006

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Europe PubMed Central

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28 December 2019

Applied and Environmental Microbiology

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16885315%20AND%20SRC:MED&resulttype=core&format=json

28 December 2019

72

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16885315%20AND%20SRC:MED&resulttype=core&format=json

28 December 2019

8

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16885315%20AND%20SRC:MED&resulttype=core&format=json

28 December 2019

5610-5614

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16885315%20AND%20SRC:MED&resulttype=core&format=json

28 December 2019

Development of a Scorpion probe-based real-time PCR for the sensitive quantification of Bacteroides sp. ribosomal DNA from human and cattle origin and evaluation in spring water matrices.

1 reference

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28 May 2018

Comparison of bacteroides-prevotella 16S rRNA genetic markers for fecal samples from different animal species

1 reference

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Host distributions of uncultivated fecal Bacteroidales bacteria reveal genetic markers for fecal source identification

1 reference

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Real-time PCR for quantification of Giardia and Cryptosporidium in environmental water samples and sewage

1 reference

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Evaluation of a rapid, quantitative real-time PCR method for enumeration of pathogenic Candida cells in water

1 reference

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28 May 2018

Application of a rapid method for identifying fecal pollution sources in a multi-use estuary

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538736

28 May 2018

Microbial source tracking: state of the science

1 reference

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28 May 2018

Application of the 5' fluorogenic exonuclease assay (TaqMan) for quantitative ribosomal DNA and rRNA analysis in sediments

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538736

28 May 2018

Geographical structure and host specificity in bacteria and the implications for tracing the source of coliform contamination

1 reference

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28 May 2018

Rapid method for coextraction of DNA and RNA from natural environments for analysis of ribosomal DNA- and rRNA-based microbial community composition

1 reference

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28 May 2018

Quantitative analysis of small-subunit rRNA genes in mixed microbial populations via 5'-nuclease assays

1 reference

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28 May 2018

A PCR assay To discriminate human and ruminant feces on the basis of host differences in Bacteroides-Prevotella genes encoding 16S rRNA

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538736

28 May 2018

Identification of nonpoint sources of fecal pollution in coastal waters by using host-specific 16S ribosomal DNA genetic markers from fecal anaerobes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538736

28 May 2018

3'-minor groove binder-DNA probes increase sequence specificity at PCR extension temperatures

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538736

28 May 2018

Direct analysis of genes encoding 16S rRNA from complex communities reveals many novel molecular species within the human gut.

1 reference

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28 May 2018

Persistence of PCR-detectable Bacteroides distasonis from human feces in river water

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538736

28 May 2018

Efficient priming of PCR with short oligonucleotides conjugated to a minor groove binder

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538736

28 May 2018

Distribution of sulfate-reducing bacteria in a stratified fjord (Mariager Fjord, Denmark) as evaluated by most-probable-number counts and denaturing gradient gel electrophoresis of PCR-amplified ribosomal DNA fragments

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538736

28 May 2018

Design and evaluation of Bacteroides DNA probes for the specific detection of human fecal pollution

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538736

28 May 2018

Survival and detection of Bacteroides spp., prospective indicator bacteria

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538736

28 May 2018

An assessment of Bacteroides fragilis group organisms as indicators of human faecal pollution

1 reference

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28 May 2018

Bacterial dynamics in spring water of alpine karst aquifers indicates the presence of stable autochthonous microbial endokarst communities.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538736

16 August 2018

Detection and quantification of the human-specific HF183 Bacteroides 16S rRNA genetic marker with real-time PCR for assessment of human faecal pollution in freshwater.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538736

16 August 2018

Quantification of Fusarium graminearum in infected wheat by species specific real-time PCR applying a TaqMan Probe

1 reference

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16 August 2018

Tiered approach for identification of a human fecal pollution source at a recreational beach: case study at Avalon Bay, Catalina Island, California

1 reference

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16 August 2018

Application of polymerase chain reaction (PCR) and TaqMan™ PCR techniques to the detection and identification of Rhodococcus coprophilus in faecal samples

1 reference

https://pubmed.ncbi.nlm.nih.gov/16885315

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The enumeration of Bacteroides fragilis group organisms from sewage and natural waters

1 reference

https://pubmed.ncbi.nlm.nih.gov/16885315

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Quantification of Stachybotrys chartarum conidia in indoor dust using real time, fluorescent probe-based detection of PCR products

1 reference

https://pubmed.ncbi.nlm.nih.gov/16885315

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1128/AEM.00364-06

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16885315%20AND%20SRC:MED&resulttype=core&format=json

28 December 2019

PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16885315%20AND%20SRC:MED&resulttype=core&format=json

28 December 2019

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16885315%20AND%20SRC:MED&resulttype=core&format=json

28 December 2019

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