Home
Random
Nearby
Log in
Settings
Donate
About Wikidata
Disclaimers
Search
(Q42554402)
Watch
English
SABBAC: online Structural Alphabet-based protein BackBone reconstruction from Alpha-Carbon trace.
scientific article published on July 2006
In more languages
default for all languages
No label defined
No description defined
edit
Statements
instance of
scholarly article
1 reference
stated in
Europe PubMed Central
PMC publication ID
1538914
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16844979%20AND%20SRC:MED&resulttype=core&format=json
retrieved
27 December 2019
title
SABBAC: online Structural Alphabet-based protein BackBone reconstruction from Alpha-Carbon trace
(English)
1 reference
stated in
Europe PubMed Central
PMC publication ID
1538914
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16844979%20AND%20SRC:MED&resulttype=core&format=json
retrieved
27 December 2019
author
Julien Maupetit
series ordinal
1
1 reference
stated in
Europe PubMed Central
PMC publication ID
1538914
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16844979%20AND%20SRC:MED&resulttype=core&format=json
retrieved
27 December 2019
Pierre Tuffery
series ordinal
3
1 reference
stated in
Europe PubMed Central
PMC publication ID
1538914
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16844979%20AND%20SRC:MED&resulttype=core&format=json
retrieved
27 December 2019
author name string
R Gautier
series ordinal
2
1 reference
stated in
Europe PubMed Central
PMC publication ID
1538914
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16844979%20AND%20SRC:MED&resulttype=core&format=json
retrieved
27 December 2019
language of work or name
English
0 references
publication date
1 July 2006
1 reference
stated in
Europe PubMed Central
PMC publication ID
1538914
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16844979%20AND%20SRC:MED&resulttype=core&format=json
retrieved
27 December 2019
published in
Nucleic Acids Research
1 reference
stated in
Europe PubMed Central
PMC publication ID
1538914
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16844979%20AND%20SRC:MED&resulttype=core&format=json
retrieved
27 December 2019
volume
34
1 reference
stated in
Europe PubMed Central
PMC publication ID
1538914
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16844979%20AND%20SRC:MED&resulttype=core&format=json
retrieved
27 December 2019
issue
Web Server issue
1 reference
stated in
Europe PubMed Central
PMC publication ID
1538914
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16844979%20AND%20SRC:MED&resulttype=core&format=json
retrieved
27 December 2019
page(s)
W147-51
1 reference
stated in
Europe PubMed Central
PMC publication ID
1538914
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16844979%20AND%20SRC:MED&resulttype=core&format=json
retrieved
27 December 2019
cites work
Dependency between consecutive local conformations helps assemble protein structures from secondary structures using Go potential and greedy algorithm.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538914
retrieved
28 May 2018
Critical assessment of methods of protein structure prediction (CASP)--round 6.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538914
retrieved
28 May 2018
TM-align: a protein structure alignment algorithm based on the TM-score
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538914
retrieved
28 May 2018
Improved greedy algorithm for protein structure reconstruction.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538914
retrieved
28 May 2018
SCit: web tools for protein side chain conformation analysis
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538914
retrieved
28 May 2018
A hidden markov model derived structural alphabet for proteins.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538914
retrieved
28 May 2018
Peptide backbone reconstruction using dead-end elimination and a knowledge-based forcefield
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538914
retrieved
28 May 2018
The Protein Data Bank
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538914
retrieved
28 May 2018
Reconstruction of protein conformations from estimated positions of the C alpha coordinates
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538914
retrieved
28 May 2018
A molecular dynamics approach for the generation of complete protein structures from limited coordinate data.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538914
retrieved
28 May 2018
Building proteins from C alpha coordinates using the dihedral probability grid Monte Carlo method
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538914
retrieved
28 May 2018
Calculation of protein backbone geometry from alpha-carbon coordinates based on peptide-group dipole alignment
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538914
retrieved
28 May 2018
Conversion from a virtual-bond chain to a complete polypeptide backbone chain.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538914
retrieved
28 May 2018
Using known substructures in protein model building and crystallography
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538914
retrieved
28 May 2018
Modelling the polypeptide backbone with 'spare parts' from known protein structures
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538914
retrieved
28 May 2018
Rebuilding flavodoxin from C alpha coordinates: a test study
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538914
retrieved
28 May 2018
Database algorithm for generating protein backbone and side-chain co-ordinates from a C alpha trace application to model building and detection of co-ordinate errors.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538914
retrieved
28 May 2018
Accurate modeling of protein conformation by automatic segment matching
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538914
retrieved
28 May 2018
An efficient method for reconstructing protein backbones from alpha-carbon coordinates.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538914
retrieved
16 August 2018
A fast method to sample real protein conformational space.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538914
retrieved
16 August 2018
The building of protein structures from alpha-carbon coordinates
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/16844979
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Construction of a full three-dimensional model of the transpeptidase domain of Streptococcus pneumoniae PBP2x starting from its Calpha-atom coordinates
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/16844979
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Energy-based reconstruction of a protein backbone from its alpha-carbon trace by a Monte-Carlo method
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/16844979
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Identifiers
DOI
10.1093/NAR/GKL289
1 reference
stated in
Europe PubMed Central
PMC publication ID
1538914
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16844979%20AND%20SRC:MED&resulttype=core&format=json
retrieved
27 December 2019
DBLP publication ID
journals/nar/MaupetitGT06
1 reference
stated in
DBLP Dataset 2021-01-02
retrieved
28 January 2021
PMC publication ID
1538914
1 reference
stated in
Europe PubMed Central
PMC publication ID
1538914
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16844979%20AND%20SRC:MED&resulttype=core&format=json
retrieved
27 December 2019
PubMed publication ID
16844979
1 reference
stated in
Europe PubMed Central
PMC publication ID
1538914
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16844979%20AND%20SRC:MED&resulttype=core&format=json
retrieved
27 December 2019
ResearchGate publication ID
6940797
0 references
Sitelinks
Wikipedia
(0 entries)
edit
Wikibooks
(0 entries)
edit
Wikinews
(0 entries)
edit
Wikiquote
(0 entries)
edit
Wikisource
(0 entries)
edit
Wikiversity
(0 entries)
edit
Wikivoyage
(0 entries)
edit
Wiktionary
(0 entries)
edit
Multilingual sites
(0 entries)
edit