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English
A symbolic-numeric approach to find patterns in genomes. Application to the translation initiation sites of E. coli.
scientific article published on November 1999
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scholarly article
1 reference
stated in
Europe PubMed Central
PubMed publication ID
10575363
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:10575363%20AND%20SRC:MED&resulttype=core&format=json
retrieved
2 November 2019
title
A symbolic-numeric approach to find patterns in genomes. Application to the translation initiation sites of E. coli
(English)
1 reference
stated in
Europe PubMed Central
PubMed publication ID
10575363
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:10575363%20AND%20SRC:MED&resulttype=core&format=json
retrieved
2 November 2019
main subject
Escherichia coli
0 references
author
Robin Gras
series ordinal
3
1 reference
stated in
Europe PubMed Central
PubMed publication ID
10575363
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:10575363%20AND%20SRC:MED&resulttype=core&format=json
retrieved
2 November 2019
author name string
C Delamarche
series ordinal
1
1 reference
stated in
Europe PubMed Central
PubMed publication ID
10575363
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:10575363%20AND%20SRC:MED&resulttype=core&format=json
retrieved
2 November 2019
P Guerdoux-Jamet
series ordinal
2
1 reference
stated in
Europe PubMed Central
PubMed publication ID
10575363
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:10575363%20AND%20SRC:MED&resulttype=core&format=json
retrieved
2 November 2019
J Nicolas
series ordinal
4
1 reference
stated in
Europe PubMed Central
PubMed publication ID
10575363
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:10575363%20AND%20SRC:MED&resulttype=core&format=json
retrieved
2 November 2019
publication date
1 November 1999
1 reference
stated in
Europe PubMed Central
PubMed publication ID
10575363
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:10575363%20AND%20SRC:MED&resulttype=core&format=json
retrieved
2 November 2019
published in
Biochimie
1 reference
stated in
Europe PubMed Central
PubMed publication ID
10575363
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:10575363%20AND%20SRC:MED&resulttype=core&format=json
retrieved
2 November 2019
volume
81
1 reference
stated in
Europe PubMed Central
PubMed publication ID
10575363
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:10575363%20AND%20SRC:MED&resulttype=core&format=json
retrieved
2 November 2019
issue
11
1 reference
stated in
Europe PubMed Central
PubMed publication ID
10575363
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:10575363%20AND%20SRC:MED&resulttype=core&format=json
retrieved
2 November 2019
page(s)
1065-1072
1 reference
stated in
Europe PubMed Central
PubMed publication ID
10575363
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:10575363%20AND%20SRC:MED&resulttype=core&format=json
retrieved
2 November 2019
cites work
Polypeptide Chain Initiation: Nucleotide Sequences of the Three Ribosomal Binding Sites in Bacteriophage R17 RNA
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0300-9084%2899%2900328-4
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
The 3'-terminal sequence of Escherichia coli 16S ribosomal RNA: complementarity to nonsense triplets and ribosome binding sites
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0300-9084%2899%2900328-4
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
How ribosomes select initiator regions in mRNA: base pair formation between the 3' terminus of 16S rRNA and the mRNA during initiation of protein synthesis in Escherichia coli
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0300-9084%2899%2900328-4
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Specialized ribosome system: preferential translation of a single mRNA species by a subpopulation of mutated ribosomes in Escherichia coli
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0300-9084%2899%2900328-4
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
A single base change in the Shine-Dalgarno region of 16S rRNA of Escherichia coli affects translation of many proteins
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0300-9084%2899%2900328-4
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Translational initiation in prokaryotes
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0300-9084%2899%2900328-4
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Translation initiation in Escherichia coli: sequences within the ribosome-binding site
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0300-9084%2899%2900328-4
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Nature of the ribosomal mRNA track: analysis of ribosome-binding sites containing different sequences and secondary structures
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0300-9084%2899%2900328-4
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Quantitative analysis of ribosome binding sites in E.coli
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0300-9084%2899%2900328-4
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Determination of the optimal aligned spacing between the Shine-Dalgarno sequence and the translation initiation codon of Escherichia coli mRNAs
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0300-9084%2899%2900328-4
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Translational initiation on structured messengers. Another role for the Shine-Dalgarno interaction.
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0300-9084%2899%2900328-4
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Translation initiation in Escherichia coli: old and new questions
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0300-9084%2899%2900328-4
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
An additional ribosome-binding site on mRNA of highly expressed genes and a bifunctional site on the colicin fragment of 16S rRNA from Escherichia coli: important determinants of the efficiency of translation-initiation.
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0300-9084%2899%2900328-4
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
The initiation of translation in E. coli: apparent base pairing between the 16srRNA and downstream sequences of the mRNA
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0300-9084%2899%2900328-4
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
The downstream box: an efficient and independent translation initiation signal in Escherichia coli
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0300-9084%2899%2900328-4
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
A second putative mRNA binding site on the Escherichia coli ribosome.
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0300-9084%2899%2900328-4
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
The complete genome sequence of Escherichia coli K-12
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0300-9084%2899%2900328-4
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Characterization of translational initiation sites in E. coli
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0300-9084%2899%2900328-4
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Use of the ‘Perceptron’ algorithm to distinguish translational initiation sites inE. coli
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0300-9084%2899%2900328-4
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Sequence logos: a new way to display consensus sequences
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0300-9084%2899%2900328-4
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
GeneMark.hmm: new solutions for gene finding
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0300-9084%2899%2900328-4
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Combining diverse evidence for gene recognition in completely sequenced bacterial genomes.
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0300-9084%2899%2900328-4
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
What constitutes the signal for the initiation of protein synthesis on Escherichia coli mRNAs?
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0300-9084%2899%2900328-4
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Identifiers
DOI
10.1016/S0300-9084(99)00328-4
1 reference
stated in
Europe PubMed Central
PubMed publication ID
10575363
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:10575363%20AND%20SRC:MED&resulttype=core&format=json
retrieved
2 November 2019
PubMed publication ID
10575363
1 reference
stated in
Europe PubMed Central
PubMed publication ID
10575363
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:10575363%20AND%20SRC:MED&resulttype=core&format=json
retrieved
2 November 2019
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