(Q42635759)

4 November 2017

A new repeat-masking method enables specific detection of homologous sequences (English)

1 reference

4 November 2017

Martin C Frith

1

1 reference

PMC publication ID

3045581

4 November 2017

language of work or name

English

0 references

publication date

24 November 2010

1 reference

4 November 2017

Nucleic Acids Research

1 reference

4 November 2017

39

1 reference

4 November 2017

4

1 reference

4 November 2017

e23

1 reference

Creative Commons Attribution-NonCommercial 2.5 Generic

4 November 2017

start time

4 October 2016

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

More than 1,001 problems with protein domain databases: transmembrane regions, signal peptides and the issue of sequence homology

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3045581

ESTIMATING THE GUMBEL SCALE PARAMETER FOR LOCAL ALIGNMENT OF RANDOM SEQUENCES BY IMPORTANCE SAMPLING WITH STOPPING TIMES

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3045581

Parameters for accurate genome alignment

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3045581

Comparative genomics and molecular dynamics of DNA repeats in eukaryotes

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3045581

Discovering regulatory motifs in the Plasmodium genome using comparative genomics

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3045581

Detecting microsatellites within genomes: significant variation among algorithms

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3045581

The construction of amino acid substitution matrices for the comparison of proteins with non-standard compositions

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3045581

Genome sequence and comparative analysis of the model rodent malaria parasite Plasmodium yoelii yoelii

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3045581

Tandem repeats finder: a program to analyze DNA sequences

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3045581

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3045581

Analysis of compositionally biased regions in sequence databases

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3045581

Improved tools for biological sequence comparison

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3045581

Estimation of the number of nucleotide substitutions when there are strong transition-transversion and G+C-content biases

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3045581

Amino acid substitution matrices from protein blocks

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3045581

Post-processing long pairwise alignments.

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3045581

Modeling the percolation of annotation errors in a database of protein sequences

16 August 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21109538

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

A fast and symmetric DUST implementation to mask low-complexity DNA sequences

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21109538

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1093/NAR/GKQ1212

1 reference

4 November 2017

1 reference

PMC publication ID

3045581

4 November 2017

PubMed publication ID

21109538

1 reference

PMC publication ID

3045581