(Q42680447)

English

A CTCF-dependent silencer located in the differentially methylated area may regulate expression of a housekeeping gene overlapping a tissue-specific gene domain

scientific article published on March 2006

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scholarly article

1 reference

Europe PubMed Central

PMC publication ID

4 November 2017

A CTCF-dependent silencer located in the differentially methylated area may regulate expression of a housekeeping gene overlapping a tissue-specific gene domain (English)

1 reference

Europe PubMed Central

PMC publication ID

4 November 2017

0 references

housekeeping gene

0 references

7

1 reference

Europe PubMed Central

PMC publication ID

4 November 2017

author name string

Denis Klochkov

1

1 reference

Europe PubMed Central

PMC publication ID

4 November 2017

Héctor Rincón-Arano

2

1 reference

Europe PubMed Central

PMC publication ID

4 November 2017

Elena S Ioudinkova

3

1 reference

Europe PubMed Central

PMC publication ID

4 November 2017

Viviana Valadez-Graham

4

1 reference

Europe PubMed Central

PMC publication ID

4 November 2017

Alexey Gavrilov

5

1 reference

Europe PubMed Central

PMC publication ID

4 November 2017

Félix Recillas-Targa

6

1 reference

Europe PubMed Central

PMC publication ID

4 November 2017

language of work or name

0 references

publication date

1 March 2006

1 reference

Europe PubMed Central

PMC publication ID

4 November 2017

Molecular and Cellular Biology

1 reference

Europe PubMed Central

PMC publication ID

4 November 2017

26

1 reference

Europe PubMed Central

PMC publication ID

4 November 2017

5

1 reference

Europe PubMed Central

PMC publication ID

4 November 2017

1589-1597

1 reference

Europe PubMed Central

PMC publication ID

4 November 2017

Heightened expression of CTCF in breast cancer cells is associated with resistance to apoptosis.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1430243

27 May 2018

CTCF is conserved from Drosophila to humans and confers enhancer blocking of the Fab-8 insulator

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1430243

27 May 2018

The binding sites for the chromatin insulator protein CTCF map to DNA methylation-free domains genome-wide

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1430243

27 May 2018

CTCF-dependent enhancer blockers at the upstream region of the chicken alpha-globin gene domain

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1430243

27 May 2018

Genomic domains and regulatory elements operating at the domain level

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1430243

27 May 2018

Position-effect protection and enhancer blocking by the chicken beta-globin insulator are separable activities

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1430243

27 May 2018

Identification of a conserved erythroid specific domain of histone acetylation across the alpha-globin gene cluster

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1430243

27 May 2018

CTCF is a uniquely versatile transcription regulator linked to epigenetics and disease

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1430243

27 May 2018

CpG methylation regulates the Igf2/H19 insulator

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1430243

27 May 2018

Functional gene expression domains: defining the functional unit of eukaryotic gene regulation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1430243

27 May 2018

Extensive methylation of a part of the CpG island located 3.0-4.5 kbp upstream to the chicken alpha-globin gene cluster may contribute to silencing the globin genes in non-erythroid cells

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1430243

27 May 2018

CTCF mediates methylation-sensitive enhancer-blocking activity at the H19/Igf2 locus

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1430243

27 May 2018

Methylation of a CTCF-dependent boundary controls imprinted expression of the Igf2 gene

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1430243

27 May 2018

A novel gene is transcribed in the chicken alpha-globin gene domain in the direction opposite to the globin genes.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1430243

27 May 2018

Positional enhancer-blocking activity of the chicken beta-globin insulator in transiently transfected cells

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1430243

27 May 2018

The protein CTCF is required for the enhancer blocking activity of vertebrate insulators

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1430243

27 May 2018

Molecular weight abnormalities of the CTCF transcription factor: CTCF migrates aberrantly in SDS-PAGE and the size of the expressed protein is affected by the UTRs and sequences within the coding region of the CTCF gene

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1430243

27 May 2018

Characterization of the chicken beta-globin insulator

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1430243

27 May 2018

An exceptionally conserved transcriptional repressor, CTCF, employs different combinations of zinc fingers to bind diverged promoter sequences of avian and mammalian c-myc oncogenes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1430243

27 May 2018

Conservation of position and sequence of a novel, widely expressed gene containing the major human alpha-globin regulatory element

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1430243

27 May 2018

Homology of a 130-kb region enclosing the alpha-globin gene cluster, the alpha-locus controlling region, and two non-globin genes in human and mouse

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1430243

27 May 2018

CTCF, a conserved nuclear factor required for optimal transcriptional activity of the chicken c-myc gene, is an 11-Zn-finger protein differentially expressed in multiple forms

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1430243

27 May 2018

Excision close to matrix attachment regions of the entire chicken alpha-globin gene domain by nuclease S1 and characterization of the framing structures

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1430243

27 May 2018

Silencer and enhancer elements located at the 3'-side of the chicken and duck alpha-globin-encoding gene domains

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1430243

27 May 2018

Contrasting effects of alpha and beta globin regulatory elements on chromatin structure may be related to their different chromosomal environments

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1430243

27 May 2018

Hormone-dependent terminal differentiation in vitro of chicken erythroleukemia cells transformed by ts mutants of avian erythroblastosis virus

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1430243

27 May 2018

Erythroblast cell lines transformed by a temperature-sensitive mutant of avian erythroblastosis virus: a model system to study erythroid differentiation in vitro.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1430243

27 May 2018

Equilibria and kinetics of lac repressor-operator interactions by polyacrylamide gel electrophoresis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1430243

27 May 2018

Replication origins are attached to the nuclear skeleton

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1430243

27 May 2018

Protein-binding sites within the 5' DNase I-hypersensitive region of the chicken alpha D-globin gene

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1430243

27 May 2018

Mutational analysis of the chicken beta-globin enhancer reveals two positive-acting domains

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1430243

27 May 2018

Identification and characterization of a chicken alpha-globin enhancer

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1430243

27 May 2018

Characterization of DNA pattern in the site of permanent attachment to the nuclear matrix located in the vicinity of replication origin

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1430243

27 May 2018

Organization of the 3'-boundary of the chicken alpha globin gene domain and characterization of a CR 1-specific protein binding site

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1430243

27 May 2018

A novel sequence-specific DNA binding protein which interacts with three regularly spaced direct repeats of the CCCTC-motif in the 5'-flanking sequence of the chicken c-myc gene

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1430243

27 May 2018

Transcriptional enhancer in the vicinity of a replication origin within the 5' region of the chicken alpha-globin gene domain

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1430243

27 May 2018

The presence of sequence-specific protein binding sites correlate with replication activity and matrix binding in a 1.7 Kb-long DNA fragment of the chicken alpha-globin gene domain

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1430243

27 May 2018

Precise localization of the alpha-globin gene cluster within one of the 20- to 300-kilobase DNA fragments released by cleavage of chicken chromosomal DNA at topoisomerase II sites in vivo: evidence that the fragments are DNA loops or domains

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1430243

27 May 2018

Cis-acting sequences regulating expression of the human alpha-globin cluster lie within constitutively open chromatin

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1430243

27 May 2018

Characterization and comparison of the human and mouse Dist1/alpha-globin complex reveals a tightly packed multiple gene cluster containing differentially expressed transcription units.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1430243

16 August 2018

Propagation of globin DNAase i-hypersensitive sites in absence of factors required for induction: A possible mechanism for determination

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1430243

16 August 2018

Characterization of the chromatin structure in the upstream region of the chicken alpha-globin gene domain

1 reference

https://pubmed.ncbi.nlm.nih.gov/16478981

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Analysis of the replication direction through the domain of alpha-globin-encoding chicken genes

1 reference

https://pubmed.ncbi.nlm.nih.gov/16478981

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Functional association of CTCF with the insulator upstream of the H19 gene is parent of origin-specific and methylation-sensitive

1 reference

https://pubmed.ncbi.nlm.nih.gov/16478981

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Comparative genome analysis delimits a chromosomal domain and identifies key regulatory elements in the alpha globin cluster

1 reference

https://pubmed.ncbi.nlm.nih.gov/16478981

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Tissue-specific DNA cleavages in the globin chromatin domain introduced by DNAase I

1 reference

https://pubmed.ncbi.nlm.nih.gov/16478981

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1128/MCB.26.5.1589-1597.2006

1 reference

Europe PubMed Central

PMC publication ID

4 November 2017

PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

4 November 2017

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

4 November 2017

ResearchGate publication ID

0 references

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