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ARCS: scaffolding genome drafts with linked reads.
scientific article published on 23 October 2017
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instance of
scholarly article
1 reference
stated in
Europe PubMed Central
PMC publication ID
6030987
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29069293%20AND%20SRC:MED&resulttype=core&format=json
retrieved
8 April 2020
title
ARCS: scaffolding genome drafts with linked reads
(English)
1 reference
stated in
Europe PubMed Central
PMC publication ID
6030987
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29069293%20AND%20SRC:MED&resulttype=core&format=json
retrieved
8 April 2020
author
René L Warren
series ordinal
4
1 reference
stated in
Europe PubMed Central
PMC publication ID
6030987
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29069293%20AND%20SRC:MED&resulttype=core&format=json
retrieved
8 April 2020
Inanc Birol
series ordinal
5
1 reference
stated in
Europe PubMed Central
PMC publication ID
6030987
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29069293%20AND%20SRC:MED&resulttype=core&format=json
retrieved
8 April 2020
author name string
Sarah Yeo
series ordinal
1
1 reference
stated in
Europe PubMed Central
PMC publication ID
6030987
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29069293%20AND%20SRC:MED&resulttype=core&format=json
retrieved
8 April 2020
Lauren Coombe
series ordinal
2
1 reference
stated in
Europe PubMed Central
PMC publication ID
6030987
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29069293%20AND%20SRC:MED&resulttype=core&format=json
retrieved
8 April 2020
René L Warren
series ordinal
3
1 reference
stated in
Europe PubMed Central
PMC publication ID
6030987
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29069293%20AND%20SRC:MED&resulttype=core&format=json
retrieved
8 April 2020
language of work or name
English
0 references
publication date
1 March 2018
1 reference
stated in
Europe PubMed Central
PMC publication ID
6030987
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29069293%20AND%20SRC:MED&resulttype=core&format=json
retrieved
8 April 2020
published in
Bioinformatics
1 reference
stated in
Europe PubMed Central
PMC publication ID
6030987
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29069293%20AND%20SRC:MED&resulttype=core&format=json
retrieved
8 April 2020
volume
34
1 reference
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Europe PubMed Central
PMC publication ID
6030987
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29069293%20AND%20SRC:MED&resulttype=core&format=json
retrieved
8 April 2020
issue
5
1 reference
stated in
Europe PubMed Central
PMC publication ID
6030987
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29069293%20AND%20SRC:MED&resulttype=core&format=json
retrieved
8 April 2020
page(s)
725-731
1 reference
stated in
Europe PubMed Central
PMC publication ID
6030987
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29069293%20AND%20SRC:MED&resulttype=core&format=json
retrieved
8 April 2020
copyright license
Creative Commons Attribution-NonCommercial 4.0 International
start time
23 October 2017
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April 2022 Public Data File from Crossref
copyright status
copyrighted
0 references
cites work
Direct determination of diploid genome sequences
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PubMed Central
reference URL
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ABySS 2.0: resource-efficient assembly of large genomes using a Bloom filter.
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Genome assembly from synthetic long read clouds
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Extensive sequencing of seven human genomes to characterize benchmark reference materials
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Coming of age: ten years of next-generation sequencing technologies
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A hybrid approach for de novo human genome sequence assembly and phasing
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Health and population effects of rare gene knockouts in adult humans with related parents
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15 July 2018
Haplotyping germline and cancer genomes with high-throughput linked-read sequencing
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15 July 2018
LINKS: Scalable, alignment-free scaffolding of draft genomes with long reads.
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6030987
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15 July 2018
BFC: correcting Illumina sequencing errors
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NxTrim: optimized trimming of Illumina mate pair reads.
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In vitro, long-range sequence information for de novo genome assembly via transposase contiguity
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15 July 2018
A comprehensive evaluation of assembly scaffolding tools
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Whole-genome haplotyping using long reads and statistical methods
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Fast and accurate long-read alignment with Burrows-Wheeler transform
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Circos: an information aesthetic for comparative genomics
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PubMed Central
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15 July 2018
Identifiers
DOI
10.1093/BIOINFORMATICS/BTX675
1 reference
stated in
Europe PubMed Central
PMC publication ID
6030987
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29069293%20AND%20SRC:MED&resulttype=core&format=json
retrieved
8 April 2020
DBLP publication ID
journals/bioinformatics/YeoCWCB18
1 reference
stated in
DBLP Dataset 2021-01-02
retrieved
28 January 2021
PMC publication ID
6030987
1 reference
stated in
Europe PubMed Central
PMC publication ID
6030987
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29069293%20AND%20SRC:MED&resulttype=core&format=json
retrieved
8 April 2020
PubMed publication ID
29069293
1 reference
stated in
Europe PubMed Central
PMC publication ID
6030987
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29069293%20AND%20SRC:MED&resulttype=core&format=json
retrieved
8 April 2020
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