(Q43070602)

13 November 2017

Atomistic view of the conformational activation of Src kinase using the string method with swarms-of-trajectories (English)

1 reference

13 November 2017

Wenxun Gan

1

1 reference

13 November 2017

Sichun Yang

series ordinal

2

1 reference

13 November 2017

Benoît Roux

series ordinal

3

1 reference

13 November 2017

language of work or name

English

0 references

publication date

1 August 2009

1 reference

13 November 2017

1 reference

13 November 2017

97

1 reference

13 November 2017

4

1 reference

13 November 2017

L8-L10

1 reference

Mapping the conformational transition in Src activation by cumulating the information from multiple molecular dynamics trajectories

13 November 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2726321

A conserved protonation-dependent switch controls drug binding in the Abl kinase

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2726321

An electrostatic network and long-range regulation of Src kinases

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2726321

Flexibility and charge asymmetry in the activation loop of Src tyrosine kinases

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2726321

Src kinase conformational activation: thermodynamics, pathways, and mechanisms

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2726321

Finding transition pathways using the string method with swarms of trajectories

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2726321

Solvent coarse-graining and the string method applied to the hydrophobic collapse of a hydrated chain

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2726321

Src kinase activation: A switched electrostatic network

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2726321

The N-terminal end of the catalytic domain of SRC kinase Hck is a conformational switch implicated in long-range allosteric regulation

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2726321

The crystal structure of a c-Src complex in an active conformation suggests possible steps in c-Src activation

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2726321

Src family kinases, key regulators of signal transduction

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2726321

Dynamic coupling between the SH2 and SH3 domains of c-Src and Hck underlies their inactivation by C-terminal tyrosine phosphorylation

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2726321

Crystal structures of c-Src reveal features of its autoinhibitory mechanism

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2726321

Nonreceptor tyrosine protein kinases.

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2726321

String method in collective variables: minimum free energy paths and isocommittor surfaces.

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2726321

Anatomy of a structural pathway for activation of the catalytic domain of Src kinase Hck

15 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2726321

Protein Conformational Transitions: The Closure Mechanism of a Kinase Explored by Atomistic Simulations

1 December 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19686639

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1016/J.BPJ.2009.06.016

1 reference

13 November 2017

1 reference

13 November 2017

PubMed publication ID

19686639

1 reference