(Q43076646)

13 November 2017

title

Circadian input kinases and their homologs in cyanobacteria: evolutionary constraints versus architectural diversification (English)

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13 November 2017

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Ivan Baca

1

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13 November 2017

Daniel Sprockett

series ordinal

2

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13 November 2017

Volodymyr Dvornyk

series ordinal

3

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13 November 2017

publication date

1 May 2010

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Journal of Molecular Evolution

13 November 2017

published in

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13 November 2017

volume

70

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13 November 2017

issue

5

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13 November 2017

page(s)

453-465

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Basic local alignment search tool

13 November 2017

cites work

1 reference

https://api.crossref.org/works/10.1007%2FS00239-010-9344-0

HyPhy: hypothesis testing using phylogenies

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00239-010-9344-0

Phylogenetic analyses of Synechococcus strains (cyanobacteria) using sequences of 16S rDNA and part of the phycocyanin operon reveal multiple evolutionary lines and reflect phycobilin content

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00239-010-9344-0

A general empirical model of protein evolution derived from multiple protein families using a maximum-likelihood approach

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00239-010-9344-0

Microfossils and possible microfossils from the Early Archean Onverwacht Group, Barberton Mountain Land, South Africa

21 January 2018

1 reference

12 December 2020

The evolutionary diversification of cyanobacteria: molecular-phylogenetic and paleontological perspectives

1 reference

12 December 2020

Functional divergence of the circadian clock proteins in prokaryotes

1 reference

12 December 2020

Origin and evolution of circadian clock genes in prokaryotes

1 reference

12 December 2020

Unbiased estimation of the rates of synonymous and nonsynonymous substitution

1 reference

12 December 2020

LdpA: a component of the circadian clock senses redox state of the cell

1 reference

12 December 2020

The phytochromes, a family of red/far-red absorbing photoreceptors.

1 reference

12 December 2020

Crystal structure of the chromophore binding domain of an unusual bacteriophytochrome, RpBphP3, reveals residues that modulate photoconversion

1 reference

12 December 2020

Three-dimensional crystal structure of the transcription factor PhoB receiver domain

1 reference

12 December 2020

Detection of seven major evolutionary lineages in cyanobacteria based on the 16S rRNA gene sequence analysis with new sequences of five marine Synechococcus strains

1 reference

12 December 2020

A kaiC-interacting sensory histidine kinase, SasA, necessary to sustain robust circadian oscillation in cyanobacteria.

1 reference

12 December 2020

Characterization of the photoactive GAF domain of the CikA homolog (SyCikA, Slr1969) of the cyanobacterium Synechocystis sp. PCC 6803.

1 reference

12 December 2020

Expression of a gene cluster kaiABC as a circadian feedback process in cyanobacteria.

1 reference

12 December 2020

Early Archean (3.3-billion to 3.5-billion-year-old) microfossils from Warrawoona Group, Australia

1 reference

12 December 2020

Rapid diversification of marine picophytoplankton with dissimilar light-harvesting structures inferred from sequences of Prochlorococcus and Synechococcus (Cyanobacteria).

1 reference

12 December 2020

Quinone sensing by the circadian input kinase of the cyanobacterial circadian clock

1 reference

12 December 2020

Estimation of the number of nucleotide substitutions in the control region of mitochondrial DNA in humans and chimpanzees

1 reference

12 December 2020

In vivo function of Hsp90 is dependent on ATP binding and ATP hydrolysis

1 reference

12 December 2020

Structure validation by Calpha geometry: phi,psi and Cbeta deviation

1 reference

12 December 2020

Solar ultraviolet and the evolutionary history of cyanobacteria

1 reference

12 December 2020

Biochemical properties of CikA, an unusual phytochrome-like histidine protein kinase that resets the circadian clock in Synechococcus elongatus PCC 7942.

1 reference

12 December 2020

CDD: a curated Entrez database of conserved domain alignments

1 reference

12 December 2020

PAML 4: phylogenetic analysis by maximum likelihood

1 reference

12 December 2020

Prochlorococcus, a marine photosynthetic prokaryote of global significance

1 reference

12 December 2020

Complete Genome Structure of Gloeobacter violaceus PCC 7421, a Cyanobacterium that Lacks Thylakoids

1 reference

12 December 2020

Verification of protein structures: patterns of nonbonded atomic interactions

1 reference

12 December 2020

IMPALA: matching a protein sequence against a collection of PSI-BLAST-constructed position-specific score matrices

1 reference

12 December 2020

Assessment of protein models with three-dimensional profiles

1 reference

12 December 2020

MUSCLE: multiple sequence alignment with high accuracy and high throughput

1 reference

12 December 2020

High resolution structure of Deinococcus bacteriophytochrome yields new insights into phytochrome architecture and evolution

1 reference

12 December 2020

Cyanobacterial circadian clockwork: roles of KaiA, KaiB and the kaiBC promoter in regulating KaiC

1 reference

12 December 2020

Cloning of a sensory-kinase-encoding gene that belongs to the two-component regulatory family from the cyanobacterium Synechococcus sp. PCC7942.

1 reference

12 December 2020

Concerted and birth-and-death evolution of multigene families

1 reference

12 December 2020

The Adaptive Value of Circadian Clocks

1 reference

12 December 2020

The circadian clocks of plants and cyanobacteria

1 reference

12 December 2020

Can correct protein models be identified?

1 reference

12 December 2020

Branch length estimation and divergence dating: estimates of error in Bayesian and maximum likelihood frameworks

1 reference

12 December 2020

Biochemical evidence for a timing mechanism in prochlorococcus

1 reference

12 December 2020

Molecular evolution of ldpA, a gene mediating the circadian input signal in cyanobacteria

1 reference

12 December 2020

A Simple, Fast, and Accurate Algorithm to Estimate Large Phylogenies by Maximum Likelihood

1 reference

12 December 2020

Approximate likelihood-ratio test for branches: A fast, accurate, and powerful alternative

1 reference

12 December 2020

ConSeq: the identification of functionally and structurally important residues in protein sequences

1 reference

12 December 2020

The structure of the signal receiver domain of the Arabidopsis thaliana ethylene receptor ETR1

1 reference

12 December 2020

Cyanobacterial circadian clocks--timing is everything

1 reference

12 December 2020

MODELTEST: testing the model of DNA substitution

1 reference

12 December 2020

KaiB functions as an attenuator of KaiC phosphorylation in the cyanobacterial circadian clock system.

1 reference

12 December 2020

Phytochrome assembly. Defining chromophore structural requirements for covalent attachment and photoreversibility

1 reference

12 December 2020

Solution Structure of a Cyanobacterial Phytochrome GAF Domain in the Red-Light-Absorbing Ground State

1 reference

12 December 2020

Signal transduction: Gyrating protein kinases

1 reference

12 December 2020

Neoarchean biomineralization by benthic cyanobacteria.

1 reference

12 December 2020

RevTrans: Multiple alignment of coding DNA from aligned amino acid sequences.

1 reference

12 December 2020

Archean microfossils: a reappraisal of early life on Earth

1 reference

12 December 2020

Genome streamlining results in loss of robustness of the circadian clock in the marine cyanobacterium Prochlorococcus marinus PCC 9511.

1 reference

12 December 2020

Evolution of gene fusions: horizontal transfer versus independent events

1 reference

12 December 2020

Late Proterozoic rise in atmospheric oxygen concentration inferred from phylogenetic and sulphur-isotope studies

1 reference

12 December 2020

Subfamilies of cpmA, a gene involved in circadian output, have different evolutionary histories in cyanobacteria

1 reference

12 December 2020

CikA, a bacteriophytochrome that resets the cyanobacterial circadian clock

1 reference

12 December 2020

MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) Software Version 4.0

1 reference

12 December 2020

The pseudo-receiver domain of CikA regulates the cyanobacterial circadian input pathway

1 reference

12 December 2020

Histidine kinases: diversity of domain organization

1 reference

12 December 2020

An improved general amino acid replacement matrix

1 reference

12 December 2020

BEAST: Bayesian evolutionary analysis by sampling trees

1 reference

12 December 2020

Evolution of the Zfx and Zfy genes: rates and interdependence between the genes

1 reference

12 December 2020

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

1 reference

12 December 2020

Structure and molecular phylogeny of sasA genes in cyanobacteria: insights into evolution of the prokaryotic circadian system

1 reference

12 December 2020

2-Methylhopanoids as biomarkers for cyanobacterial oxygenic photosynthesis

1 reference

12 December 2020

Genome sequence of the cyanobacterium Prochlorococcus marinus SS120, a nearly minimal oxyphototrophic genome

1 reference

12 December 2020

10.1007/S00239-010-9344-0

Identifiers

DOI

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13 November 2017

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