(Q43101417)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20387919%20AND%20SRC:MED&resulttype=core&format=json

30 January 2020

title

Replica-exchange method in van der Waals radius space: overcoming steric restrictions for biomolecules (English)

1 reference

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30 January 2020

3

1 reference

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30 January 2020

author name string

Satoru G Itoh

series ordinal

1

1 reference

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30 January 2020

Hisashi Okumura

series ordinal

2

1 reference

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30 January 2020

language of work or name

English

0 references

publication date

1 April 2010

1 reference

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Journal of Chemical Physics

30 January 2020

published in

1 reference

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30 January 2020

volume

132

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30 January 2020

issue

13

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30 January 2020

page(s)

134105

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Equation of State Calculations by Fast Computing Machines

30 January 2020

cites work

1 reference

Canonical dynamics: Equilibrium phase-space distributions

21 January 2018

1 reference

Generalized-ensemble algorithms for molecular simulations of biopolymers

21 January 2018

1 reference

Replica-exchange molecular dynamics method for protein folding

21 January 2018

1 reference

Multicanonical ensemble: A new approach to simulate first-order phase transitions

21 January 2018

1 reference

Monte Carlo simulations in generalized isobaric-isothermal ensembles.

21 January 2018

1 reference

Multibaric-multithermal ensemble molecular dynamics simulations.

21 January 2018

1 reference

Multioverlap simulations for transitions between reference configurations

21 January 2018

1 reference

Theoretical studies of transition states by the multioverlap molecular dynamics methods.

21 January 2018

1 reference

Effective sampling in the configurational space of a small peptide by the multicanonical-multioverlap algorithm.

21 January 2018

1 reference

Replica exchange with solute tempering: a method for sampling biological systems in explicit water

21 January 2018

1 reference

Enhanced sampling of peptide and protein conformations using replica exchange simulations with a peptide backbone biasing-potential.

21 January 2018

1 reference

Dissociation aided and side chain sampling enhanced Hamiltonian replica exchange.

21 January 2018

1 reference

THE weighted histogram analysis method for free-energy calculations on biomolecules. I. The method

21 January 2018

1 reference

Comparison of simple potential functions for simulating liquid water

21 January 2018

1 reference

Explicit symplectic integrators of molecular dynamics algorithms for rigid-body molecules in the canonical, isobaric-isothermal, and related ensembles.

21 January 2018

1 reference

Temperature and pressure dependence of alanine dipeptide studied by multibaric-multithermal molecular dynamics simulations

21 January 2018

1 reference

Partial multicanonical algorithm for molecular dynamics and Monte Carlo simulations

21 January 2018

1 reference

RASMOL: biomolecular graphics for all

21 January 2018

1 reference

Generalized-ensemble algorithms for molecular dynamics simulations

21 January 2018

1 reference

Molecular dynamics, Langevin and hydrid Monte Carlo simulations in a multicanonical ensemble

21 January 2018

1 reference

Monte Carlo simulations in multibaric–multithermal ensemble

21 January 2018

1 reference

Liquid–Gas Phase Transitions Studied by Multibaric–Multithermal Monte Carlo Simulations

21 January 2018

1 reference

Molecular dynamics simulations in the multibaric–multithermal ensemble

21 January 2018

1 reference

Multi-overlap molecular dynamics methods for biomolecular systems

21 January 2018

1 reference

Multidimensional replica-exchange method for free-energy calculations

21 January 2018

1 reference

Multibaric–Multithermal Molecular Dynamics Simulation of Alanine Dipeptide in Explicit Water

21 January 2018

1 reference

21 January 2018

Identifiers

DOI

10.1063/1.3372767

1 reference

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30 January 2020

1 reference

1 reference