(Q43122448)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18842631%20AND%20SRC:MED&resulttype=core&format=json

15 January 2020

title

KineticDB: a database of protein folding kinetics (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18842631%20AND%20SRC:MED&resulttype=core&format=json

15 January 2020

0 references

0 references

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18842631%20AND%20SRC:MED&resulttype=core&format=json

15 January 2020

Alexandr Osypov

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18842631%20AND%20SRC:MED&resulttype=core&format=json

15 January 2020

Dmitry Ivankov

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18842631%20AND%20SRC:MED&resulttype=core&format=json

15 January 2020

author name string

Natalya S Bogatyreva

1

1 reference

14 November 2017

Alexander A Osypov

2

1 reference

14 November 2017

Dmitry N Ivankov

3

1 reference

14 November 2017

language of work or name

English

0 references

publication date

8 October 2008

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18842631%20AND%20SRC:MED&resulttype=core&format=json

15 January 2020

published in

Nucleic Acids Research

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18842631%20AND%20SRC:MED&resulttype=core&format=json

15 January 2020

volume

37

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18842631%20AND%20SRC:MED&resulttype=core&format=json

15 January 2020

issue

Database issue

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18842631%20AND%20SRC:MED&resulttype=core&format=json

15 January 2020

page(s)

D342-6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18842631%20AND%20SRC:MED&resulttype=core&format=json

Kemp elimination catalysts by computational enzyme design

15 January 2020

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686587

De novo computational design of retro-aldol enzymes

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686587

High-resolution structure prediction and the crystallographic phase problem

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686587

Protein Folding Database (PFD 2.0): an online environment for the International Foldeomics Consortium.

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686587

FOLD-RATE: prediction of protein folding rates from amino acid sequence

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686587

Protein folding: defining a "standard" set of experimental conditions and a preliminary kinetic data set of two-state proteins

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686587

PFD: a database for the investigation of protein folding kinetics and stability

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686587

Prediction of protein folding rates from the amino acid sequence-predicted secondary structure.

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686587

Contact order revisited: influence of protein size on the folding rate

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686587

The complete folding pathway of a protein from nanoseconds to microseconds

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686587

Absolute comparison of simulated and experimental protein-folding dynamics

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686587

How the folding rate constant of simple, single-domain proteins depends on the number of native contacts

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686587

The Protein Data Bank and the challenge of structural genomics

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686587

A simple model for calculating the kinetics of protein folding from three-dimensional structures

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686587

Prediction of protein-folding mechanisms from free-energy landscapes derived from native structures

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686587

A theoretical search for folding/unfolding nuclei in three-dimensional protein structures

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686587

Contact order, transition state placement and the refolding rates of single domain proteins.

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686587

SCOP: a structural classification of proteins database for the investigation of sequences and structures

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686587

Direct correlation between proteins' folding rates and their amino acid compositions: an ab initio folding rate prediction.

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686587

Scaling of folding times with protein size

15 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686587

Simple physical models connect theory and experiment in protein folding kinetics

15 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686587

Theoretical study of a landscape of protein folding-unfolding pathways. Folding rates at midtransition.

15 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686587

How do small single-domain proteins fold?

15 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686587

Outlining Folding Nuclei in Globular Proteins

15 August 2018

1 reference

Crossref

https://api.crossref.org/works/10.1093%2FNAR%2FGKN696

Entropy capacity determines protein folding

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1093%2FNAR%2FGKN696

More compact protein globules exhibit slower folding rates

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686587

Local secondary structure content predicts folding rates for simple, two-state proteins

1 December 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/18842631

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1093/NAR/GKN696

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18842631%20AND%20SRC:MED&resulttype=core&format=json

journals/nar/BogatyrevaOI09

15 January 2020

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18842631%20AND%20SRC:MED&resulttype=core&format=json

15 January 2020

PubMed publication ID

18842631

1 reference