(Q43616437)

25 November 2017

title

Three-dimensional interaction of Phi29 pRNA dimer probed by chemical modification interference, cryo-AFM, and cross-linking (English)

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25 November 2017

Mat-Arip Y

1

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25 November 2017

Garver K

2

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25 November 2017

Chen C

3

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25 November 2017

Sheng S

4

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25 November 2017

Shao Z

5

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25 November 2017

Guo P

6

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25 November 2017

language of work or name

English

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publication date

22 May 2001

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Journal of Biological Chemistry

25 November 2017

number of pages

10

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based on heuristic

inferred from page(s)

published in

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25 November 2017

volume

276

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25 November 2017

issue

35

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25 November 2017

page(s)

32575-32584

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Sequences involved in the dimerisation of human T cell leukaemia virus type-1 RNA.

25 November 2017

cites work

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M100045200

Identification of the primary site of the human immunodeficiency virus type 1 RNA dimerization in vitro

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M100045200

A cooperative interaction between U2AF65 and mBBP/SF1 facilitates branchpoint region recognition

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M100045200

The RNA moiety of ribonuclease P is the catalytic subunit of the enzyme

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M100045200

Interaction of the 3′-end of tRNA with ribonuclease P RNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M100045200

Control of transcription termination in prokaryotes

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M100045200

Riboregulation in Escherichia coli: DsrA RNA acts by RNA:RNA interactions at multiple loci

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M100045200

The cold shock domain protein LIN-28 controls developmental timing in C. elegans and is regulated by the lin-4 RNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M100045200

Complex formed by complementary RNA stem-loops and its stabilization by a protein: Function of ColE1 Rom protein

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M100045200

A small viral RNA is required for in vitro packaging of bacteriophage phi 29 DNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M100045200

Characterization of the small RNA of the bacteriophage phi 29 DNA packaging machine

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M100045200

Inter-RNA interaction of phage phi29 pRNA to form a hexameric complex for viral DNA transportation

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M100045200

A dimer as a building block in assembling RNA. A hexamer that gears bacterial virus phi29 DNA-translocating machinery

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M100045200

Probing the structure of monomers and dimers of the bacterial virus phi29 hexamer RNA complex by chemical modification.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M100045200

Kinetic parameters of the translocation of bacteriophage T4 gene 41 protein helicase on single-stranded DNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M100045200

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M100045200

Kinetic theory of ATP-driven translocases on one-dimensional polymer lattices.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M100045200

DNA helicases: new breeds of translocating motors and molecular pumps

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M100045200

Homomorphous hexameric helicases: tales from the ring cycle.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M100045200

Six molecules of SV40 large T antigen assemble in a propeller-shaped particle around a channel.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M100045200

A transcriptional enhancer whose function imposes a requirement that proteins track along DNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M100045200

A physical model for the translocation and helicase activities of Escherichia coli transcription termination protein Rho

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M100045200

Riding the (mono)rails: the structure of catenated DNA-tracking proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M100045200

RNA-RNA interaction is required for the formation of specific bicoid mRNA 3' UTR-STAUFEN ribonucleoprotein particles.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M100045200

Circularly permuted viral pRNA active and specific in the packaging of bacteriophage phi 29 DNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M100045200

Sequence requirement for hand-in-hand interaction in formation of RNA dimers and hexamers to gear phi29 DNA translocation motor

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M100045200

On finding all suboptimal foldings of an RNA molecule

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M100045200

sRNA of phage phi 29 of Bacillus subtilis mediates DNA packaging of phi 29 proheads assembled in Escherichia coli

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M100045200

Regulation of the phage phi 29 prohead shape and size by the portal vertex

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M100045200

Protein-priming of DNA replication

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M100045200

A highly sensitive system for the in vitro assembly of bacteriophage phi 29 of Bacillus subtilis

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M100045200

A defined system for in vitro packaging of DNA-gp3 of the Bacillus subtilis bacteriophage phi 29.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M100045200

Cryo atomic force microscopy: a new approach for biological imaging at high resolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M100045200

Imaging biological structures with the cryo atomic force microscope

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M100045200

Folding of Circularly Permuted Transfer RNAs

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M100045200

Circularly permuted tRNAs as specific photoaffinity probes of ribonuclease P RNA structure.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M100045200

Mapping the inter-RNA interaction of bacterial virus phi29 packaging RNA by site-specific photoaffinity cross-linking

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M100045200

Conservation of the primary structure at the 3' end of 18S rRNA from eucaryotic cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M100045200

Identification of a site on 23S ribosomal RNA located at the peptidyl transferase center

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M100045200

Secondary structure of the circular form of the Tetrahymena rRNA intervening sequence: a technique for RNA structure analysis using chemical probes and reverse transcriptase

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M100045200

Bacteriophage DNA packaging: RNA gears in a DNA transport machine

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M100045200

RNA pseudoknots: structure, detection, and prediction

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M100045200

Computer method for predicting the secondary structure of single-stranded RNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M100045200

A loop-loop "kissing" complex is the essential part of the dimer linkage of genomic HIV-1 RNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M100045200

Mapping of poly(A) sequences in the electron microscope reveals unusual structure of type C oncornavirus RNA molecules

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M100045200

The structure of an RNA "kissing" hairpin complex of the HIV TAR hairpin loop and its complement

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M100045200

Complementary large loops determine the rate of RNA duplex formation in vitro in the case of an effective antisense RNA directed against the human immunodeficiency virus type 1.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M100045200

Prohead RNA of bacteriophage phi 29: size, stoichiometry and biological activity

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M100045200

E. coli RNA polymerase interacts homologously with two different promoters

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M100045200

Interaction of U2AF65 RS region with pre-mRNA branch point and promotion of base pairing with U2 snRNA [corrected]

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M100045200

BOTANY: An RNA-Based Information Superhighway in Plants

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M100045200

RNA and the epigenetic regulation of X chromosome inactivation

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M100045200

Function of hexameric RNA in packaging of bacteriophage phi 29 DNA in vitro

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M100045200

Prohead and DNA-gp3-dependent ATPase activity of the DNA packaging protein gp16 of bacteriophage phi 29

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M100045200

The proximate 5' and 3' ends of the 120-base viral RNA (pRNA) are crucial for the packaging of bacteriophage phi 29 DNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M100045200

Rapid chemical probing of conformation in 16 S ribosomal RNA and 30 S ribosomal subunits using primer extension

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M100045200

Sequencing psoralen photochemically reactive sites in Escherichia coli 16 S rRNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M100045200

21 January 2018

Identifiers

DOI

10.1074/JBC.M100045200

1 reference

25 November 2017

1 reference