(Q43701176)

26 November 2017

A sequence and structural study of transmembrane helices (English)

1 reference

26 November 2017

transmembrane protein

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author name string

R P Bywater

series ordinal

1

1 reference

PubMed ID

11495225

26 November 2017

D Thomas

series ordinal

2

1 reference

PubMed ID

11495225

26 November 2017

G Vriend

series ordinal

3

1 reference

26 November 2017

1 June 2001

1 reference

Journal of Computer - Aided Molecular Design

26 November 2017

1 reference

26 November 2017

15

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26 November 2017

6

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26 November 2017

533-552

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https://scigraph.springernature.com/pub.10.1023/a:1011197908960

26 November 2017

0 references

cites work

Statistical analysis of amino acid patterns in transmembrane helices: the GxxxG motif occurs frequently and in association with beta-branched residues at neighboring positions.

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12 December 2020

The interaction of class B G protein-coupled receptors with their hormones.

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Pitch diversity in alpha-helical coiled coils

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Constitutive activation of opsin by mutation of methionine 257 on transmembrane helix 6.

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Protein structural classes in five complete genomes

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12 December 2020

Are there dominant membrane protein families with a given number of helices?

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12 December 2020

Proline-induced constraints in alpha-helices

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12 December 2020

Effect of alanine versus glycine in alpha-helices on protein stability

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12 December 2020

Proline residues in transmembrane helices: structural or dynamic role?

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12 December 2020

Three-dimensional modelling of G protein-linked receptors

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12 December 2020

WHAT IF: a molecular modeling and drug design program

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12 December 2020

Experimentally observed conformation-dependent geometry and hidden strain in proteins

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12 December 2020

Movement of retinal along the visual transduction path

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12 December 2020

The use of position-specific rotamers in model building by homology

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12 December 2020

Helix packing in membrane proteins

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12 December 2020

Local and distant protein structural changes on photoisomerization of the retinal in bacteriorhodopsin.

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12 December 2020

An alpha-carbon template for the transmembrane helices in the rhodopsin family of G-protein-coupled receptors

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12 December 2020

What makes red visual pigments red? A resonance Raman microprobe study of retinal chromophore structure in iodopsin

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12 December 2020

Molecular dynamics of dopamine at the D2 receptor

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12 December 2020

Structure and function in rhodopsin. Single cysteine substitution mutants in the cytoplasmic interhelical E-F loop region show position-specific effects in transducin activation

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12 December 2020

Conformations of proline residues in membrane environments

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12 December 2020

Peptide-bond distortions and the curvature of alpha-helices

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12 December 2020

Helix to helix packing in proteins

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12 December 2020

The evolution and structure of aminergic G protein-coupled receptors

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12 December 2020

Seven-helix bundles: molecular modeling via restrained molecular dynamics.

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12 December 2020

Principles of helix-helix packing in proteins: the helical lattice superposition model.

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12 December 2020

Improved prediction of protein secondary structure by use of sequence profiles and neural networks

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12 December 2020

Membrane protein structure prediction. Hydrophobicity analysis and the positive-inside rule

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12 December 2020

Using known substructures in protein model building and crystallography

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12 December 2020

The steric trigger in rhodopsin activation

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12 December 2020

A simplified mechanical model of proteins tested on the globin fold.

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12 December 2020

The role of proline and glycine in determining the backbone flexibility of a channel-forming peptide

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12 December 2020

Stereochemical quality of protein structure coordinates

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12 December 2020

Interhelical hydrogen bonding drives strong interactions in membrane proteins

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12 December 2020

The effects of polar and/or ionizable residues in the core and flanking regions of hydrophobic helices on transmembrane conformation and oligomerization.

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12 December 2020

Identification of class-determining residues in G protein-coupled receptors by sequence analysis.

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12 December 2020

Helix-helix packing in a membrane-like environment

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12 December 2020

Heat capacity of hydrogen-bonded networks: an alternative view of protein folding thermodynamics.

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12 December 2020

Requirement of rigid-body motion of transmembrane helices for light activation of rhodopsin

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12 December 2020

Evaluation of methods for the prediction of membrane protein secondary structures

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12 December 2020

Structure of the integral membrane domain of the GLP1 receptor

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12 December 2020

A common step for signal transduction in G protein-coupled receptors

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12 December 2020

Backbone--side-chain interactions in serine. Synthesis, crystal structure and solution conformation of a linear model peptide N-Boc-L-Ser-L-Phe-OCH3.

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12 December 2020

A measure of helical propensity for amino acids in membrane environments

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12 December 2020

The protein data bank: A computer-based archival file for macromolecular structures

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12 December 2020

The structure of Fis mutant Pro61Ala illustrates that the kink within the long alpha-helix is not due to the presence of the proline residue

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12 December 2020

Mapping light-dependent structural changes in the cytoplasmic loop connecting helices C and D in rhodopsin: a site-directed spin labeling study.

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12 December 2020

Proline kinks in transmembrane alpha-helices

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12 December 2020

The role of turns in the structure of an alpha-helical protein.

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12 December 2020

Backbone side chain interactions in peptides. I. Crystal structures of model dipeptides with the Pro-Ser sequence

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12 December 2020

Do transmembrane protein superfolds exist?

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12 December 2020

Peptides in membranes: helicity and hydrophobicity

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12 December 2020

Automated method for modeling seven-helix transmembrane receptors from experimental data

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12 December 2020

Binding pathway of retinal to bacterio-opsin: a prediction by molecular dynamics simulations

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12 December 2020

Structure and function in rhodopsin. Cysteines 65 and 316 are in proximity in a rhodopsin mutant as indicated by disulfide formation and interactions between attached spin labels

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12 December 2020

SCOP: a structural classification of proteins database for the investigation of sequences and structures

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12 December 2020

Influence of proline residues on protein conformation

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12 December 2020

Crystal structure of rhodopsin: A G protein-coupled receptor

1 reference

12 December 2020

The transmembrane 7-alpha-bundle of rhodopsin: distance geometry calculations with hydrogen bonding constraints

1 reference

12 December 2020

Helix geometry in proteins

1 reference

12 December 2020

A model of the adrenergic beta-2 receptor and binding sites for agonist and antagonist

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12 December 2020

Predicting local structural changes that result from point mutations

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12 December 2020

Three-dimensional structure for the β2 adrenergic receptor protein based on computer modeling studies

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12 December 2020

Structure of the ColE1 rop protein at 1.7 A resolution

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12 December 2020

Computational analysis of chain flexibility and fluctuations in Rhizomucor miehei lipase.

1 reference

12 December 2020

Three-dimensional models of neurotransmitter G-binding protein-coupled receptors

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12 December 2020

Structural organization of G-protein-coupled receptors

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12 December 2020

A method for alpha-helical integral membrane protein fold prediction.

1 reference

12 December 2020

Hydrogen bonds between short polar side chains and peptide backbone: prevalence in proteins and effects on helix-forming propensities

1 reference

12 December 2020

Modeling of transmembrane seven helix bundles

1 reference

12 December 2020

Interaction of transmembrane helices by a knobs-into-holes packing characteristic of soluble coiled coils.

1 reference

12 December 2020

Conformational parameters for amino acids in helical, beta-sheet, and random coil regions calculated from proteins

1 reference

12 December 2020

A database of mutants and effects of site-directed mutagenesis experiments on G protein-coupled receptors

1 reference

12 December 2020

Touring protein fold space with Dali/FSSP

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12 December 2020

Structure of bacteriorhodopsin at 1.55 A resolution

1 reference

12 December 2020

Identifiers

DOI

10.1023/A:1011197908960

1 reference

journals/jcamd/BywaterTV01

26 November 2017

1 reference

DBLP Dataset 2021-01-02

Dimensions Publication ID

28 January 2021

0 references

1 reference

PubMed ID

11495225