(Q43817620)

English

Functional genomic analysis of the AUXIN RESPONSE FACTOR gene family members in Arabidopsis thaliana: unique and overlapping functions of ARF7 and ARF19.

scientific article published on 19 January 2005

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scholarly article

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Europe PubMed Central

27 November 2017

Functional genomic analysis of the AUXIN RESPONSE FACTOR gene family members in Arabidopsis thaliana: unique and overlapping functions of ARF7 and ARF19. (English)

1 reference

Europe PubMed Central

27 November 2017

Arabidopsis thaliana

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functional genomics

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based on heuristic

inferred from title

author name string

Yoko Okushima

1

1 reference

Europe PubMed Central

27 November 2017

Paul J Overvoorde

2

1 reference

Europe PubMed Central

27 November 2017

Kazunari Arima

3

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Europe PubMed Central

27 November 2017

Jose M Alonso

4

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Europe PubMed Central

27 November 2017

April Chan

5

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Europe PubMed Central

27 November 2017

Charlie Chang

6

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Europe PubMed Central

27 November 2017

Joseph R Ecker

7

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Europe PubMed Central

27 November 2017

Beth Hughes

8

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Europe PubMed Central

27 November 2017

Amy Lui

9

1 reference

Europe PubMed Central

27 November 2017

Diana Nguyen

10

1 reference

Europe PubMed Central

27 November 2017

Courtney Onodera

11

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Europe PubMed Central

27 November 2017

Hong Quach

12

1 reference

Europe PubMed Central

27 November 2017

Alison Smith

13

1 reference

Europe PubMed Central

27 November 2017

Guixia Yu

14

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Europe PubMed Central

27 November 2017

Athanasios Theologis

15

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Europe PubMed Central

27 November 2017

publication date

19 January 2005

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Europe PubMed Central

27 November 2017

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Europe PubMed Central

27 November 2017

17

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27 November 2017

2

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27 November 2017

444-463

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Europe PubMed Central

27 November 2017

Plant genomics: the third wave.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=548818

27 August 2018

Disruption and overexpression of auxin response factor 8 gene of Arabidopsis affect hypocotyl elongation and root growth habit, indicating its possible involvement in auxin homeostasis in light condition.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=548818

27 August 2018

Contrasting modes of diversification in the Aux/IAA and ARF gene families

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=548818

27 August 2018

Auxin signaling and regulated protein degradation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=548818

27 August 2018

Development and evaluation of an Arabidopsis whole genome Affymetrix probe array

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=548818

27 August 2018

Heterodimeric interactions among the 1-amino-cyclopropane-1-carboxylate synthase polypeptides encoded by the Arabidopsis gene family

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=548818

27 August 2018

Overlapping and non-redundant functions of the Arabidopsis auxin response factors MONOPTEROS and NONPHOTOTROPIC HYPOCOTYL 4.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=548818

27 August 2018

Aux/IAA proteins contain a potent transcriptional repression domain

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=548818

27 August 2018

MASSUGU2 encodes Aux/IAA19, an auxin-regulated protein that functions together with the transcriptional activator NPH4/ARF7 to regulate differential growth responses of hypocotyl and formation of lateral roots in Arabidopsis thaliana.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=548818

27 August 2018

A gene expression map of the Arabidopsis root

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=548818

27 August 2018

The Arabidopsis auxin-inducible gene ARGOS controls lateral organ size

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=548818

27 August 2018

Genome-wide insertional mutagenesis of Arabidopsis thaliana

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=548818

27 August 2018

Assessing the redundancy of MADS-box genes during carpel and ovule development

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=548818

27 August 2018

Molecular and phylogenetic analyses of the complete MADS-box transcription factor family in Arabidopsis: new openings to the MADS world.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=548818

27 August 2018

The Auxin-induced Maize Gene ZmSAUR2 Encodes a Short-lived Nuclear Protein Expressed in Elongating Tissues

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=548818

27 August 2018

Summaries of Affymetrix GeneChip probe level data

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=548818

27 August 2018

The roles of auxin response factor domains in auxin-responsive transcription

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=548818

27 August 2018

The beta-subunit of the Arabidopsis G protein negatively regulates auxin-induced cell division and affects multiple developmental processes.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=548818

27 August 2018

Simple hormones but complex signalling

1 reference

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27 August 2018

A high-throughput Arabidopsis reverse genetics system

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=548818

27 August 2018

The Arabidopsis BODENLOS gene encodes an auxin response protein inhibiting MONOPTEROS-mediated embryo patterning

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=548818

27 August 2018

Jasmonate response locus JAR1 and several related Arabidopsis genes encode enzymes of the firefly luciferase superfamily that show activity on jasmonic, salicylic, and indole-3-acetic acids in an assay for adenylation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=548818

27 August 2018

The lateral organ boundaries gene defines a novel, plant-specific gene family

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=548818

27 August 2018

The ASYMMETRIC LEAVES2 gene of Arabidopsis thaliana, required for formation of a symmetric flat leaf lamina, encodes a member of a novel family of proteins characterized by cysteine repeats and a leucine zipper.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=548818

27 August 2018

Genetics of Aux/IAA and ARF action in plant growth and development.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=548818

27 August 2018

Visualization of interactions among bZIP and Rel family proteins in living cells using bimolecular fluorescence complementation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=548818

27 August 2018

Arabidopsis SHY2/IAA3 inhibits auxin-regulated gene expression

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=548818

27 August 2018

Auxin regulates SCF(TIR1)-dependent degradation of AUX/IAA proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=548818

27 August 2018

Roles and activities of Aux/IAA proteins in Arabidopsis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=548818

27 August 2018

IAA17/AXR3: biochemical insight into an auxin mutant phenotype

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=548818

27 August 2018

A gain-of-function mutation in IAA28 suppresses lateral root development

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=548818

27 August 2018

Genomic binding sites of the yeast cell-cycle transcription factors SBF and MBF

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=548818

27 August 2018

Analysis of the genome sequence of the flowering plant Arabidopsis thaliana

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=548818

27 August 2018

Genome-wide location and function of DNA binding proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=548818

27 August 2018

Auxin and ETTIN in Arabidopsis gynoecium morphogenesis.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=548818

27 August 2018

Degradation of Aux/IAA proteins is essential for normal auxin signalling

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=548818

27 August 2018

Molecular and biochemical evidence for the involvement of calcium/calmodulin in auxin action

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=548818

27 August 2018

Function search in a large transcription factor gene family in Arabidopsis: assessing the potential of reverse genetics to identify insertional mutations in R2R3 MYB genes.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=548818

27 August 2018

Dimerization and DNA binding of auxin response factors.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=548818

27 August 2018

Identification of an SCF ubiquitin-ligase complex required for auxin response in Arabidopsis thaliana

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=548818

27 August 2018

Activation and repression of transcription by auxin-response factors

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=548818

27 August 2018

Floral dip: a simplified method for Agrobacterium-mediated transformation of Arabidopsis thaliana

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=548818

27 August 2018

PIF3, a phytochrome-interacting factor necessary for normal photoinduced signal transduction, is a novel basic helix-loop-helix protein.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=548818

27 August 2018

The Arabidopsis gene MONOPTEROS encodes a transcription factor mediating embryo axis formation and vascular development.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=548818

27 August 2018

Changes in auxin response from mutations in an AUX/IAA gene.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=548818

27 August 2018

ETTIN patterns the Arabidopsis floral meristem and reproductive organs

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=548818

27 August 2018

Protein-protein interactions among the Aux/IAA proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=548818

27 August 2018

ARF1, a transcription factor that binds to auxin response elements

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=548818

27 August 2018

TreeView: an application to display phylogenetic trees on personal computers

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=548818

27 August 2018

DNA elements responsive to auxin

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=548818

27 August 2018

Strong, constitutive expression of the Arabidopsis ACT2/ACT8 actin subclass in vegetative tissues.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=548818

27 August 2018

Early genes and auxin action

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=548818

27 August 2018

Early auxin-induced genes encode short-lived nuclear proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=548818

27 August 2018

CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=548818

27 August 2018

The small, versatile pPZP family of Agrobacterium binary vectors for plant transformation.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=548818

27 August 2018

Arabidopsis gynoecium structure in the wild and in ettin mutants

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=548818

27 August 2018

Mutations in the NPH1 locus of Arabidopsis disrupt the perception of phototropic stimuli.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=548818

27 August 2018

The PS-IAA4/5-like family of early auxin-inducible mRNAs in Arabidopsis thaliana.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=548818

27 August 2018

LRP1, a gene expressed in lateral and adventitious root primordia of arabidopsis.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=548818

27 August 2018

Lateral root formation is blocked by a gain-of-function mutation in the SOLITARY-ROOT/IAA14 gene of Arabidopsis

1 reference

https://pubmed.ncbi.nlm.nih.gov/15659631

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Activation tagging, a novel tool to dissect the functions of a gene family

1 reference

https://pubmed.ncbi.nlm.nih.gov/15659631

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Convergence of signaling pathways in the control of differential cell growth in Arabidopsis

1 reference

https://pubmed.ncbi.nlm.nih.gov/15659631

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The NPH4 locus encodes the auxin response factor ARF7, a conditional regulator of differential growth in aerial Arabidopsis tissue

1 reference

https://pubmed.ncbi.nlm.nih.gov/15659631

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

AXR2 encodes a member of the Aux/IAA protein family

1 reference

https://pubmed.ncbi.nlm.nih.gov/15659631

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

NPH4, a conditional modulator of auxin-dependent differential growth responses in Arabidopsis

1 reference

https://pubmed.ncbi.nlm.nih.gov/15659631

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Control of auxin-regulated root development by the Arabidopsis thaliana SHY2/IAA3 gene

1 reference

https://pubmed.ncbi.nlm.nih.gov/15659631

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The massugu1 mutation of Arabidopsis identified with failure of auxin-induced growth curvature of hypocotyl confers auxin insensitivity to hypocotyl and leaf

1 reference

https://pubmed.ncbi.nlm.nih.gov/15659631

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

How does auxin turn on genes?

1 reference

https://pubmed.ncbi.nlm.nih.gov/15659631

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1105/TPC.104.028316

1 reference

Europe PubMed Central

27 November 2017

0 references

1 reference

Europe PubMed Central

27 November 2017

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