(Q44004039)

28 November 2017

title

Prediction of protein-RNA binding sites by a random forest method with combined features (English)

1 reference

28 November 2017

1 reference

Zhi-Ping Liu

1

1 reference

28 November 2017

Ling-Yun Wu

2

1 reference

28 November 2017

Yong Wang

3

1 reference

28 November 2017

Xiang-Sun Zhang

4

1 reference

28 November 2017

Luonan Chen

5

1 reference

28 November 2017

language of work or name

English

0 references

publication date

18 May 2010

1 reference

28 November 2017

number of pages

7

1 reference

based on heuristic

inferred from page(s)

published in

Bioinformatics

1 reference

28 November 2017

volume

26

1 reference

28 November 2017

issue

13

1 reference

28 November 2017

page(s)

1616-1622

1 reference

Structure-based analysis of protein-RNA interactions using the program ENTANGLE.

28 November 2017

cites work

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTQ253

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTQ253

21 January 2018

The Protein Data Bank

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTQ253

The nucleic acid database. A comprehensive relational database of three-dimensional structures of nucleic acids

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTQ253

Identifying Important Risk Factors for Survival in Kidney Graft Failure Patients Using Random Survival Forests

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTQ253

Predicting RNA-binding sites from the protein structure based on electrostatics, evolution and geometry.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTQ253

Predicting RNA-binding sites of proteins using support vector machines and evolutionary information

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTQ253

A universal mode of helix packing in RNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTQ253

RNA-binding proteins and post-transcriptional gene regulation

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTQ253

21 January 2018

RNA-protein interactions

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTQ253

Protein-RNA interactions: a structural analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTQ253

Dictionary of protein secondary structure: pattern recognition of hydrogen-bonded and geometrical features

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTQ253

Computational analysis of hydrogen bonds in protein–RNA complexes for interaction patterns

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTQ253

Amino acid residue doublet propensity in the protein-RNA interface and its application to RNA interface prediction

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTQ253

Prediction of RNA binding sites in a protein using SVM and PSSM profile.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTQ253

Prediction of protein-protein binding site by using core interface residue and support vector machine

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTQ253

Bridging protein local structures and protein functions

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTQ253

RNA-binding proteins: modular design for efficient function

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTQ253

Protein-RNA interactions: exploring binding patterns with a three-dimensional superposition analysis of high resolution structures

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTQ253

Conservation and prediction of solvent accessibility in protein families

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTQ253

Prediction of interacting single-stranded RNA bases by protein-binding patterns

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTQ253

Protein function annotation from sequence: prediction of residues interacting with RNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTQ253

Correlation of sequence hydrophobicities measures similarity in three-dimensional protein structure

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTQ253

Prediction of RNA binding sites in proteins from amino acid sequence

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTQ253

RNABindR: a server for analyzing and predicting RNA-binding sites in proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTQ253

The universal protein resource (UniProt)

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTQ253

BindN: a web-based tool for efficient prediction of DNA and RNA binding sites in amino acid sequences.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTQ253

Nearest-neighbor effects on backbone alpha and beta carbon chemical shifts in proteins.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTQ253

Identification of direct residue contacts in protein-protein interaction by message passing

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTQ253

10.1093/BIOINFORMATICS/BTQ253

21 January 2018

Identifiers

DOI

1 reference

journals/bioinformatics/LiuWWZC10

28 November 2017

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

release_q7vwftlc7fhzjlg7ffmdmzwkia

28 January 2021

Fatcat ID

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/q7vwftlc7fhzjlg7ffmdmzwkia

mapped directly with Wikidata item

24 November 2022

based on heuristic

1 reference