(Q44081211)

English

Candidate gene association mapping of Sclerotinia stalk rot resistance in sunflower (Helianthus annuus L.) uncovers the importance of COI1 homologs

scientific article published on 6 November 2013

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scholarly article

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Europe PubMed Central

PubMed publication ID

29 November 2017

Candidate gene association mapping of Sclerotinia stalk rot resistance in sunflower (Helianthus annuus L.) uncovers the importance of COI1 homologs (English)

1 reference

Europe PubMed Central

PubMed publication ID

29 November 2017

common sunflower

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Brian Scheffler

4

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Europe PubMed Central

PubMed publication ID

29 November 2017

author name string

Zahirul I Talukder

1

1 reference

Europe PubMed Central

PubMed publication ID

29 November 2017

Brent S Hulke

2

1 reference

Europe PubMed Central

PubMed publication ID

29 November 2017

Lili Qi

3

1 reference

Europe PubMed Central

PubMed publication ID

29 November 2017

Venkatramana Pegadaraju

5

1 reference

Europe PubMed Central

PubMed publication ID

29 November 2017

Kevin McPhee

6

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Europe PubMed Central

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29 November 2017

Thomas J Gulya

7

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Europe PubMed Central

PubMed publication ID

29 November 2017

language of work or name

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publication date

6 November 2013

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Europe PubMed Central

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29 November 2017

Theoretical and Applied Genetics

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Europe PubMed Central

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29 November 2017

127

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Europe PubMed Central

PubMed publication ID

29 November 2017

1

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Europe PubMed Central

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29 November 2017

193-209

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Europe PubMed Central

PubMed publication ID

29 November 2017

https://scigraph.springernature.com/pub.10.1007/s00122-013-2210-x

0 references

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

1 reference

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21 January 2018

Characterization of phenylpropanoid pathway genes within European maize (Zea mays L.) inbreds

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21 January 2018

A tutorial on statistical methods for population association studies

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21 January 2018

Haploview: analysis and visualization of LD and haplotype maps

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21 January 2018

Sclerotinia sclerotiorum (Lib.) de Bary: biology and molecular traits of a cosmopolitan pathogen

1 reference

https://api.crossref.org/works/10.1007%2FS00122-013-2210-X

21 January 2018

Development of an ultra-dense genetic map of the sunflower genome based on single-feature polymorphisms

1 reference

https://api.crossref.org/works/10.1007%2FS00122-013-2210-X

21 January 2018

TASSEL: software for association mapping of complex traits in diverse samples

1 reference

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21 January 2018

Extreme population-dependent linkage disequilibrium detected in an inbreeding plant species, Hordeum vulgare

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21 January 2018

Reduced cellulose synthesis invokes lignification and defense responses in Arabidopsis thaliana

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SNiPlay: a web-based tool for detection, management and analysis of SNPs. Application to grapevine diversity projects

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21 January 2018

Detecting the number of clusters of individuals using the software STRUCTURE: a simulation study

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https://api.crossref.org/works/10.1007%2FS00122-013-2210-X

21 January 2018

Structure of linkage disequilibrium in plants

1 reference

https://api.crossref.org/works/10.1007%2FS00122-013-2210-X

21 January 2018

Identification of single nucleotide polymorphisms and analysis of linkage disequilibrium in sunflower elite inbred lines using the candidate gene approach

1 reference

https://api.crossref.org/works/10.1007%2FS00122-013-2210-X

21 January 2018

Association mapping in sunflower for Sclerotinia Head Rot resistance.

1 reference

https://api.crossref.org/works/10.1007%2FS00122-013-2210-X

21 January 2018

Cloning of molecular markers for disease resistance in sunflower, Helianthus annuus L.

1 reference

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21 January 2018

TNT, a free program for phylogenetic analysis

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21 January 2018

Oxalate production by Sclerotinia sclerotiorum deregulates guard cells during infection

1 reference

https://api.crossref.org/works/10.1007%2FS00122-013-2210-X

21 January 2018

Defense against Sclerotinia sclerotiorum in Arabidopsis is dependent on jasmonic acid, salicylic acid, and ethylene signaling

1 reference

https://api.crossref.org/works/10.1007%2FS00122-013-2210-X

21 January 2018

Using association mapping to dissect the genetic basis of complex traits in plants

1 reference

https://api.crossref.org/works/10.1007%2FS00122-013-2210-X

21 January 2018

Resistance gene-dependent plant defense responses

1 reference

https://api.crossref.org/works/10.1007%2FS00122-013-2210-X

21 January 2018

DNA polymorphisms and haplotype patterns of transcription factors involved in barley endosperm development are associated with key agronomic traits

1 reference

https://api.crossref.org/works/10.1007%2FS00122-013-2210-X

21 January 2018

Efficient control of population structure in model organism association mapping

1 reference

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21 January 2018

MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform

1 reference

https://api.crossref.org/works/10.1007%2FS00122-013-2210-X

21 January 2018

QTL analysis in plants; where are we now?

1 reference

https://api.crossref.org/works/10.1007%2FS00122-013-2210-X

21 January 2018

Single nucleotide polymorphisms and linkage disequilibrium in sunflower

1 reference

https://api.crossref.org/works/10.1007%2FS00122-013-2210-X

21 January 2018

Patterns of nucleotide diversity in wild and cultivated sunflower

1 reference

https://api.crossref.org/works/10.1007%2FS00122-013-2210-X

21 January 2018

Methods for linkage disequilibrium mapping in crops.

1 reference

https://api.crossref.org/works/10.1007%2FS00122-013-2210-X

21 January 2018

QTL mapping of Sclerotinia midstalk-rot resistance in sunflower.

1 reference

https://api.crossref.org/works/10.1007%2FS00122-013-2210-X

21 January 2018

Identification and validation of QTL for Sclerotinia midstalk rot resistance in sunflower by selective genotyping.

1 reference

https://api.crossref.org/works/10.1007%2FS00122-013-2210-X

21 January 2018

QTL mapping of resistance to Sclerotinia midstalk rot in RIL of sunflower population NDBLOSsel x CM625.

1 reference

https://api.crossref.org/works/10.1007%2FS00122-013-2210-X

21 January 2018

Low levels of linkage disequilibrium in wild barley (Hordeum vulgare ssp. spontaneum) despite high rates of self-fertilization

1 reference

https://api.crossref.org/works/10.1007%2FS00122-013-2210-X

21 January 2018

Association mapping: critical considerations shift from genotyping to experimental design

1 reference

https://api.crossref.org/works/10.1007%2FS00122-013-2210-X

21 January 2018

Association genetics of complex traits in conifers

1 reference

https://api.crossref.org/works/10.1007%2FS00122-013-2210-X

21 January 2018

Involvement of the R2R3-MYB, AtMYB61, in the ectopic lignification and dark-photomorphogenic components of the det3 mutant phenotype.

1 reference

https://api.crossref.org/works/10.1007%2FS00122-013-2210-X

21 January 2018

Linkage disequilibrium: what history has to tell us.

1 reference

https://api.crossref.org/works/10.1007%2FS00122-013-2210-X

21 January 2018

Association mapping in structured populations

1 reference

https://api.crossref.org/works/10.1007%2FS00122-013-2210-X

21 January 2018

Applications of single nucleotide polymorphisms in crop genetics

1 reference

https://api.crossref.org/works/10.1007%2FS00122-013-2210-X

21 January 2018

Structure of linkage disequilibrium and phenotypic associations in the maize genome

1 reference

https://api.crossref.org/works/10.1007%2FS00122-013-2210-X

21 January 2018

New dye-labeled terminators for improved DNA sequencing patterns

1 reference

https://api.crossref.org/works/10.1007%2FS00122-013-2210-X

21 January 2018

Association studies identify natural variation at PHYC linked to flowering time and morphological variation in pearl millet

1 reference

https://api.crossref.org/works/10.1007%2FS00122-013-2210-X

21 January 2018

The acyl-CoA synthetase encoded by LACS2 is essential for normal cuticle development in Arabidopsis

1 reference

https://api.crossref.org/works/10.1007%2FS00122-013-2210-X

21 January 2018

CYP71B15 (PAD3) catalyzes the final step in camalexin biosynthesis

1 reference

https://api.crossref.org/works/10.1007%2FS00122-013-2210-X

21 January 2018

The Arabidopsis det3 mutant reveals a central role for the vacuolar H(+)-ATPase in plant growth and development

1 reference

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21 January 2018

Linkage disequilibrium mapping of a Verticillium dahliae resistance quantitative trait locus in tetraploid potato (Solanum tuberosum) through a candidate gene approach

1 reference

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Mapping genes for resistance to Verticillium albo-atrum in tetraploid and diploid potato populations using haplotype association tests and genetic linkage analysis.

1 reference

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Association mapping and marker-assisted selection of the lettuce dieback resistance gene Tvr1

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Improved heritability estimation from genome-wide SNPs

1 reference

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21 January 2018

Jasmonate-dependent and COI1-independent defense responses against Sclerotinia sclerotiorum in Arabidopsis thaliana: auxin is part of COI1-independent defense signaling

1 reference

https://api.crossref.org/works/10.1007%2FS00122-013-2210-X

21 January 2018

Association mapping reveals gene action and interactions in the determination of flowering time in barley

1 reference

https://api.crossref.org/works/10.1007%2FS00122-013-2210-X

21 January 2018

Association analysis of candidate genes for maysin and chlorogenic acid accumulation in maize silks

1 reference

https://api.crossref.org/works/10.1007%2FS00122-013-2210-X

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Simple sequence repeat map of the sunflower genome

1 reference

https://api.crossref.org/works/10.1007%2FS00122-013-2210-X

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CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice

1 reference

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21 January 2018

Dwarf8 polymorphisms associate with variation in flowering time

1 reference

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21 January 2018

Efficient Markov chain Monte Carlo implementation of Bayesian analysis of additive and dominance genetic variances in noninbred pedigrees

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Dissection of maize kernel composition and starch production by candidate gene association

1 reference

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COI1: an Arabidopsis gene required for jasmonate-regulated defense and fertility

1 reference

https://api.crossref.org/works/10.1007%2FS00122-013-2210-X

21 January 2018

The SCF(COI1) ubiquitin-ligase complexes are required for jasmonate response in Arabidopsis

1 reference

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Genetic characterization and linkage disequilibrium estimation of a global maize collection using SNP markers

1 reference

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21 January 2018

An Arabidopsis example of association mapping in structured samples

1 reference

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21 January 2018

Genome-wide association mapping reveals a rich genetic architecture of complex traits in Oryza sativa

1 reference

https://api.crossref.org/works/10.1007%2FS00122-013-2210-X

21 January 2018

Arabidopsis PAD3, a gene required for camalexin biosynthesis, encodes a putative cytochrome P450 monooxygenase.

1 reference

https://api.crossref.org/works/10.1007%2FS00122-013-2210-X

21 January 2018

Status and Prospects of Association Mapping in Plants

1 reference

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Index of plant hosts of Sclerotinia sclerotiorum

1 reference

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spagedi: a versatile computer program to analyse spatial genetic structure at the individual or population levels

1 reference

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Inference of population structure using multilocus genotype data: linked loci and correlated allele frequencies

1 reference

https://pubmed.ncbi.nlm.nih.gov/24193356

12 December 2020

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Inference of population structure using multilocus genotype data

1 reference

https://pubmed.ncbi.nlm.nih.gov/24193356

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Comparative genetic analysis of quantitative traits in sunflower ( Helianthus annuus L.) 1. QTL involved in resistance to Sclerotinia sclerotiorum and Diaporthe helianthi

1 reference

https://pubmed.ncbi.nlm.nih.gov/24193356

12 December 2020

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Variances and covariances of squared linkage disequilibria in finite populations

1 reference

https://pubmed.ncbi.nlm.nih.gov/24193356

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Role of camalexin, indole glucosinolates, and side chain modification of glucosinolate-derived isothiocyanates in defense of Arabidopsis against Sclerotinia sclerotiorum

1 reference

https://pubmed.ncbi.nlm.nih.gov/24193356

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1 reference

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1 reference

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Mutations in LACS2, a long-chain acyl-coenzyme A synthetase, enhance susceptibility to avirulent Pseudomonas syringae but confer resistance to Botrytis cinerea in Arabidopsis

1 reference

https://pubmed.ncbi.nlm.nih.gov/24193356

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Comparative genetic analysis of quantitative traits in sunflower (Helianthus annuus L.) 3. Characterisation of QTL involved in resistance to Sclerotinia sclerotiorum and Phoma macdonaldi

1 reference

https://pubmed.ncbi.nlm.nih.gov/24193356

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Identifying Quantitative Trait Loci for Resistance to Sclerotinia Head Rot in Two USDA Sunflower Germplasms

1 reference

https://pubmed.ncbi.nlm.nih.gov/24193356

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based on heuristic

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1 reference

https://pubmed.ncbi.nlm.nih.gov/24193356

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Identifiers

10.1007/S00122-013-2210-X

1 reference

Europe PubMed Central

PubMed publication ID

29 November 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

29 November 2017

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