(Q44223214)

1 December 2017

Unique tertiary and neighbor interactions determine conservation patterns of Cis Watson-Crick A/G base-pairs (English)

1 reference

1 December 2017

Jirí Sponer

1

1 reference

1 December 2017

Ali Mokdad

2

1 reference

1 December 2017

Judit E Sponer

3

1 reference

1 December 2017

Nad'a Spacková

4

1 reference

1 December 2017

Jerzy Leszczynski

5

1 reference

1 December 2017

Neocles B Leontis

6

1 reference

1 December 2017

language of work or name

English

0 references

publication date

1 July 2003

1 reference

Journal of Molecular Biology

1 December 2017

1 reference

1 December 2017

330

1 reference

1 December 2017

967-978

1 reference

1 December 2017

5

1 reference

Structure, Energetics, and Dynamics of the Nucleic Acid Base Pairs: NonempiricalAb InitioCalculations

1 December 2017

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900667-3

Electronic properties, hydrogen bonding, stacking, and cation binding of DNA and RNA bases

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900667-3

7 January 2021

Nonplanar DNA Base Pairs

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900667-3

Geometric nomenclature and classification of RNA base pairs

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900667-3

Sheared purine x purine pairing in biology

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900667-3

NMR and molecular modeling evidence for a G.A mismatch base pair in a purine-rich DNA duplex

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900667-3

Crystal and molecular structure of r(CGCGAAUUAGCG): an RNA duplex containing two G(anti).A(anti) base pairs

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900667-3

Molecular structure of the G.A base pair in DNA and its implications for the mechanism of transversion mutations

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900667-3

Helix geometry, hydration, and G.A mismatch in a B-DNA decamer

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900667-3

The crystal structure of the dimerization initiation site of genomic HIV-1 RNA reveals an extended duplex with two adenine bulges

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900667-3

Crystal structure of a DNA Holliday junction

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900667-3

Solution structure of (rGCGGACGC)2 by two-dimensional NMR and the iterative relaxation matrix approach

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900667-3

Structure of (rGGCGAGCC)2 in solution from NMR and restrained molecular dynamics

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900667-3

Nearest neighbor thermodynamic parameters for internal G.A mismatches in DNA

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900667-3

The non-Watson-Crick base pairs and their associated isostericity matrices

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900667-3

Nonplanar geometries of DNA bases. Ab initio second-order Moeller-Plesset study

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900667-3

Amino groups in nucleic acid bases, aniline, aminopyridines, and aminotriazine are nonplanar: Results of correlatedabinitioquantum chemical calculations and anharmonic analysis of the aniline inversion motion

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900667-3

Bifurcated hydrogen bonds in DNA crystal structures. An ab initio quantum chemical study

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900667-3

On the potential role of the amino nitrogen atom as a hydrogen bond acceptor in macromolecules.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900667-3

Crystal structure of d(GGCCAATTGG) complexed with DAPI reveals novel binding mode

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900667-3

Vibrational transition moment angles in isolated biomolecules: a structural tool

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900667-3

Base-base and deoxyribose-base stacking interactions in B-DNA and Z-DNA: a quantum-chemical study

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900667-3

Quadruple intercalated G-6 stack: a possible motif in the fold-back structure of the Drosophila centromeric dodeca-satellite?

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900667-3

Conserved geometrical base-pairing patterns in RNA.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900667-3

Compilation of tRNA sequences and sequences of tRNA genes

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900667-3

Synthesis of aspartyl-tRNA(Asp) in Escherichia coli--a snapshot of the second step

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900667-3

Structural basis for anticodon recognition by discriminating glutamyl-tRNA synthetase

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900667-3

The crystal structure of yeast phenylalanine tRNA at 1.93 A resolution: a classic structure revisited

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900667-3

Crystal structure of a hepatitis delta virus ribozyme

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900667-3

Ribozyme activity in the genomic and antigenomic RNA strands of hepatitis delta virus

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900667-3

A pH-sensitive RNA tertiary interaction affects self-cleavage activity of the HDV ribozymes in the absence of added divalent metal ion

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900667-3

Structural and energetic analysis of RNA recognition by a universally conserved protein from the signal recognition particle

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900667-3

SRPDB (Signal Recognition Particle Database).

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900667-3

The 5S rRNA loop E: chemical probing and phylogenetic data versus crystal structure

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900667-3

Crystal structure of a hairpin ribozyme-inhibitor complex with implications for catalysis

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900667-3

Mutagenesis of the hairpin ribozyme

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900667-3

Analysis of hairpin ribozyme base mutations in loops 2 and 4 and their effects on cis-cleavage in vitro

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900667-3

Catalytic properties of hairpin ribozymes derived from Chicory yellow mottle virus and arabis mosaic virus satellite RNAs

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900667-3

Structure of the 30S ribosomal subunit

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900667-3

The European Large Subunit Ribosomal RNA Database

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900667-3

The European database on small subunit ribosomal RNA.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900667-3

The complete atomic structure of the large ribosomal subunit at 2.4 A resolution

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900667-3

High resolution structure of the large ribosomal subunit from a mesophilic eubacterium

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900667-3

Local conformational variations observed in B-DNA crystals do not improve base stacking: computational analysis of base stacking in a d(CATGGGCCCATG)(2) B<-->A intermediate crystal structure

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900667-3

Toward true DNA base-stacking energies: MP2, CCSD(T), and complete basis set calculations

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900667-3

10.1016/S0022-2836(03)00667-3

7 January 2021

Identifiers

DOI

1 reference

1 December 2017

1 reference