(Q44233714)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12458221%20AND%20SRC:MED&resulttype=core&format=json

15 December 2019

title

Rapid segmental and subdomain motions of DNA polymerase beta (English)

1 reference

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15 December 2019

6

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15 December 2019

author name string

Soon-Jong Kim

1

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15 December 2019

William A Beard

2

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15 December 2019

John Harvey

3

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15 December 2019

David D Shock

4

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15 December 2019

Jay R Knutson

5

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15 December 2019

language of work or name

English

0 references

publication date

27 November 2002

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12458221%20AND%20SRC:MED&resulttype=core&format=json

Journal of Biological Chemistry

15 December 2019

published in

1 reference

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15 December 2019

volume

278

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15 December 2019

issue

7

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15 December 2019

page(s)

5072-5081

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Structural design of a eukaryotic DNA repair polymerase: DNA polymerase beta.

15 December 2019

cites work

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DNA polymerase beta belongs to an ancient nucleotidyltransferase superfamily

21 January 2018

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Structure of large fragment of Escherichia coli DNA polymerase I complexed with dTMP

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Crystal structure of rat DNA polymerase beta: evidence for a common polymerase mechanism

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Crystal structures of human DNA polymerase beta complexed with DNA: implications for catalytic mechanism, processivity, and fidelity

21 January 2018

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Crystal structures of human DNA polymerase beta complexed with gapped and nicked DNA: evidence for an induced fit mechanism

21 January 2018

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Structures of ternary complexes of rat DNA polymerase beta, a DNA template-primer, and ddCTP

21 January 2018

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Insight into the catalytic mechanism of DNA polymerase beta: structures of intermediate complexes

21 January 2018

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DNA structure and aspartate 276 influence nucleotide binding to human DNA polymerase beta. Implication for the identity of the rate-limiting conformational change

21 January 2018

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Polymerase beta simulations suggest that Arg258 rotation is a slow step rather than large subdomain motions per se.

21 January 2018

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Use of 2-aminopurine and tryptophan fluorescence as probes in kinetic analyses of DNA polymerase beta

21 January 2018

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Force and velocity measured for single molecules of RNA polymerase.

21 January 2018

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Nonequilibrium mechanism of transcription termination from observations of single RNA polymerase molecules

21 January 2018

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Protein-protein ratchets: stochastic simulation and application to processive enzymes

21 January 2018

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Coupling of local folding to site-specific binding of proteins to DNA

21 January 2018

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Transcriptional activation domain of the herpesvirus protein VP16 becomes conformationally constrained upon interaction with basal transcription factors.

21 January 2018

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Structure of the MDM2 oncoprotein bound to the p53 tumor suppressor transactivation domain

21 January 2018

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Backbone flexibility of five sites on the catalytic subunit of cAMP-dependent protein kinase in the open and closed conformations

21 January 2018

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Decay of fluorescence emission anisotropy of the ethidium bromide-DNA complex. Evidence for an internal motion in DNA

21 January 2018

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The effects of energy transfer and rotational diffusion upon the fluorescence polarization of macromolecules.

21 January 2018

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Subnanosecond motions of tryptophan residues in proteins

21 January 2018

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Nanosecond fluorescence spectroscopy of macromolecules.

21 January 2018

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Loss of DNA polymerase beta stacking interactions with templating purines, but not pyrimidines, alters catalytic efficiency and fidelity.

21 January 2018

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Three-dimensional solution structure of the N-terminal domain of DNA polymerase beta and mapping of the ssDNA interaction interface

21 January 2018

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Functional analysis of the amino-terminal 8-kDa domain of DNA polymerase beta as revealed by site-directed mutagenesis. DNA binding and 5'-deoxyribose phosphate lyase activities

21 January 2018

1 reference

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Mapping of the 5'-2-deoxyribose-5-phosphate lyase active site in DNA polymerase beta by mass spectrometry

21 January 2018

1 reference

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Characterization of the metal ion binding helix-hairpin-helix motifs in human DNA polymerase beta by X-ray structural analysis

21 January 2018

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Time-resolved fluorescence study of the single tryptophans of engineered skeletal muscle troponin C.

21 January 2018

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Engineering out motion: a surface disulfide bond alters the mobility of tryptophan 22 in cytochrome b5 as probed by time-resolved fluorescence and 1H NMR experiments.

21 January 2018

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Internal motion of lysozyme studied by time-resolved fluorescence depolarization of tryptophan residues

21 January 2018

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Site-specific tryptophan dynamics in class A amphipathic helical peptides at a phospholipid bilayer interface

21 January 2018

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Structural insights into DNA polymerase beta fidelity: hold tight if you want it right

21 January 2018

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Identification and properties of the catalytic domain of mammalian DNA polymerase beta

21 January 2018

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Nanosecond dynamics of tryptophans in different conformational states of apomyoglobin proteins

21 January 2018

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Characterization of the tryptophan fluorescence and hydrodynamic properties of rat DNA polymerase beta

21 January 2018

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Physical studies of tyrosine and tryptophan residues in mammalian A1 heterogeneous nuclear ribonucleoprotein. Support for a segmented structure

21 January 2018

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Decay-associated fluorescence spectra and the heterogeneous emission of alcohol dehydrogenase

21 January 2018

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Time-resolved fluorescence anisotropy of HIV-1 protease inhibitor complexes correlates with inhibitory activity

21 January 2018

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Main chain and side chain dynamics of peptides in liquid solution from 13C NMR: melittin as a model peptide

21 January 2018

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21 January 2018

Identifiers

DOI

10.1074/JBC.M208472200

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12458221%20AND%20SRC:MED&resulttype=core&format=json

15 December 2019

1 reference