(Q44235307)

1 December 2017

title

The carboxy-terminal domain of the DExDH protein YxiN is sufficient to confer specificity for 23S rRNA. (English)

1 reference

1 December 2017

Karl Kossen

1

1 reference

1 December 2017

Fedor V Karginov

series ordinal

2

1 reference

1 December 2017

Olke C Uhlenbeck

series ordinal

3

1 reference

1 December 2017

language of work or name

English

0 references

publication date

1 December 2002

1 reference

Journal of Molecular Biology

1 December 2017

published in

1 reference

1 December 2017

volume

324

1 reference

1 December 2017

issue

4

1 reference

1 December 2017

page(s)

625-636

1 reference

Comparative genomics of the eukaryotes

1 December 2017

cites work

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901140-3

Active disruption of an RNA-protein interaction by a DExH/D RNA helicase

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901140-3

DExD/H box RNA helicases: from generic motors to specific dissociation functions

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901140-3

Biochemical and kinetic characterization of the RNA helicase activity of eukaryotic initiation factor 4A

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901140-3

The DExH protein NPH-II is a processive and directional motor for unwinding RNA

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901140-3

Specific alterations of U1-C protein or U1 small nuclear RNA can eliminate the requirement of Prp28p, an essential DEAD box splicing factor

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901140-3

Mechanical devices of the spliceosome: motors, clocks, springs, and things

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901140-3

An RNA switch at the 5' splice site requires ATP and the DEAD box protein Prp28p

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901140-3

RNA helicases: modulators of RNA structure

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901140-3

From RNA helicases to RNPases.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901140-3

Functional domains of the yeast splicing factor Prp22p

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901140-3

The "DEAD box" protein DbpA interacts specifically with the peptidyltransferase center in 23S rRNA.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901140-3

Ribosome-catalyzed peptide-bond formation with an A-site substrate covalently linked to 23S ribosomal RNA.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901140-3

Crystal structure of the ribosome at 5.5 A resolution

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901140-3

The Escherichia coli DEAD protein DbpA recognizes a small RNA hairpin in 23S rRNA.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901140-3

Kinetic analysis of the RNA-dependent adenosinetriphosphatase activity of DbpA, an Escherichia coli DEAD protein specific for 23S ribosomal RNA

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901140-3

Cooperative binding of ATP and RNA substrates to the DEAD/H protein DbpA.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901140-3

Interaction of the Escherichia coli DEAD box protein DbpA with 23 S ribosomal RNA.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901140-3

Escherichia coli DbpA is an RNA helicase that requires hairpin 92 of 23S rRNA.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901140-3

Cloning and biochemical characterization of Bacillus subtilis YxiN, a DEAD protein specifically activated by 23S rRNA: delineation of a novel sub-family of bacterial DEAD proteins

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901140-3

An eIF-4A-like protein is a suppressor of an Escherichia coli mutant defective in 50S ribosomal subunit assembly

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901140-3

Crystal structure of yeast initiation factor 4A, a DEAD-box RNA helicase

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901140-3

Crystal structure of a DEAD box protein from the hyperthermophile Methanococcus jannaschii

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901140-3

Hepatitis C virus NS3 RNA helicase domain with a bound oligonucleotide: the crystal structure provides insights into the mode of unwinding

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901140-3

Identification of a putative RNA helicase in E.coli

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901140-3

A temperature-sensitive mutant in the gene rplX for ribosomal protein L24 and its suppression by spontaneous mutations in a 23S rRNA gene of Escherichia coli

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901140-3

On the control of ribosomal protein biosynthesis in E. coli. IV. Studies on a temperature-sensitive mutant defective in the assembly of 50S subunits

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901140-3

mRNAs can be stabilized by DEAD-box proteins

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901140-3

Hydrolysis of adenylyl imidodiphosphate in the presence of Na+ + Mg+ by (Na+ + K+)-activated ATPase

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901140-3

Hydrolysis of AMPPNP by the motor domain of ncd, a kinesin-related protein.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901140-3

The DEAD box protein eIF4A. 1. A minimal kinetic and thermodynamic framework reveals coupled binding of RNA and nucleotide

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901140-3

Protein-facilitated RNA folding

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901140-3

New insights into the auxiliary domains of eukaryotic RNA binding proteins.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901140-3

RNA chaperones and the RNA folding problem

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901140-3

Characterization of DbpA, an Escherichia coli DEAD box protein with ATP independent RNA unwinding activity

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901140-3

The Pfam protein families database

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901140-3

deaD, a new Escherichia coli gene encoding a presumed ATP-dependent RNA helicase, can suppress a mutation in rpsB, the gene encoding ribosomal protein S2.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901140-3

U6atac snRNA, the highly divergent counterpart of U6 snRNA, is the specific target that mediates inhibition of AT-AC splicing by the influenza virus NS1 protein

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901140-3

Kinetic analysis of the effects of mutagenesis of W501 and V432 of the hepatitis C virus NS3 helicase domain on ATPase and strand-separating activity

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901140-3

Role for a bidentate ribonuclease in the initiation step of RNA interference

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901140-3

The HRIGRXXR region of the DEAD box RNA helicase eukaryotic translation initiation factor 4A is required for RNA binding and ATP hydrolysis

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901140-3

Biochemical and physical characterization of an unmodified yeast phenylalanine transfer RNA transcribed in vitro

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901140-3

In vitro synthesis of 16S ribosomal RNA containing single base changes and assembly into a functional 30S ribosome

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901140-3

Cloning, in vitro transcription, and biological activity of Escherichia coli 23S ribosomal RNA.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901140-3

Sequence-specific endoribonuclease activity of the Tetrahymena ribozyme: enhanced cleavage of certain oligonucleotide substrates that form mismatched ribozyme-substrate complexes

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901140-3

Helicase structure and mechanism

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901140-3

The comparative RNA web (CRW) site: an online database of comparative sequence and structure information for ribosomal, intron, and other RNAs

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901140-3

10.1016/S0022-2836(02)01140-3

7 January 2021

Identifiers

DOI

1 reference

1 December 2017

1 reference