(Q44266492)

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Repositioning about the dimer interface of the transcription regulator CooA: a major signal transduction pathway between the effector and DNA-binding domains

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Europe PubMed Central

PubMed publication ID

1 December 2017

Repositioning about the dimer interface of the transcription regulator CooA: a major signal transduction pathway between the effector and DNA-binding domains (English)

1 reference

Europe PubMed Central

PubMed publication ID

1 December 2017

author name string

Robert L Kerby

1

1 reference

Europe PubMed Central

PubMed publication ID

1 December 2017

Hwan Youn

2

1 reference

Europe PubMed Central

PubMed publication ID

1 December 2017

Marc V Thorsteinsson

3

1 reference

Europe PubMed Central

PubMed publication ID

1 December 2017

Gary P Roberts

4

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Europe PubMed Central

PubMed publication ID

1 December 2017

language of work or name

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publication date

1 January 2003

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Europe PubMed Central

PubMed publication ID

1 December 2017

Journal of Molecular Biology

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Europe PubMed Central

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1 December 2017

325

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Europe PubMed Central

PubMed publication ID

1 December 2017

4

1 reference

Europe PubMed Central

PubMed publication ID

1 December 2017

809-823

1 reference

Europe PubMed Central

PubMed publication ID

1 December 2017

Carbon monoxide-dependent growth of Rhodospirillum rubrum

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901203-2

7 January 2021

Carbon monoxide-induced activation of gene expression in Rhodospirillum rubrum requires the product of cooA, a member of the cyclic AMP receptor protein family of transcriptional regulators

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901203-2

7 January 2021

Heme-based sensors in biological systems

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901203-2

7 January 2021

Recent advances in heme-protein sensors

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901203-2

7 January 2021

Transcriptional regulation by cAMP and its receptor protein

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901203-2

7 January 2021

CooA: a heme-containing regulatory protein that serves as a specific sensor of both carbon monoxide and redox state

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901203-2

7 January 2021

Oxygen sensing by the global regulator, FNR: the role of the iron-sulfur cluster

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901203-2

7 January 2021

Functional versatility in the CRP-FNR superfamily of transcription factors: FNR and FLP.

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901203-2

7 January 2021

Structure of the CO sensing transcription activator CooA

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901203-2

7 January 2021

CooA, a CO-sensing transcription factor from Rhodospirillum rubrum, is a CO-binding heme protein

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901203-2

7 January 2021

A novel heme protein that acts as a carbon monoxide-dependent transcriptional activator in Rhodospirillum rubrum.

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901203-2

7 January 2021

Redox-controlled Ligand Exchange of the Heme in the CO-sensing Transcriptional Activator CooA

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901203-2

7 January 2021

Identification of two important heme site residues (cysteine 75 and histidine 77) in CooA, the CO-sensing transcription factor of Rhodospirillum rubrum

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901203-2

7 January 2021

Characterization of variants altered at the N-terminal proline, a novel heme-axial ligand in CooA, the CO-sensing transcriptional activator

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901203-2

7 January 2021

Redox properties and coordination structure of the heme in the co-sensing transcriptional activator CooA.

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901203-2

7 January 2021

Binding of CO at the Pro2 side is crucial for the activation of CO-sensing transcriptional activator CooA. (1)H NMR spectroscopic studies.

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901203-2

7 January 2021

Identification of histidine 77 as the axial heme ligand of carbonmonoxy CooA by picosecond time-resolved resonance Raman spectroscopy

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901203-2

7 January 2021

Structure of a complex of catabolite gene activator protein and cyclic AMP refined at 2.5 A resolution

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901203-2

7 January 2021

Modeling the cAMP-induced allosteric transition using the crystal structure of CAP-cAMP at 2.1 A resolution

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901203-2

7 January 2021

Characterization of a CO-responsive transcriptional activator from Rhodospirillum rubrum

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901203-2

7 January 2021

Recognition of target DNA and transcription activation by the CO-sensing transcriptional activator CooA.

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901203-2

7 January 2021

Structural understanding of the allosteric conformational change of cyclic AMP receptor protein by cyclic AMP binding

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901203-2

7 January 2021

Transcription activation by catabolite activator protein (CAP)

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901203-2

7 January 2021

Mapping CooA.RNA polymerase interactions. Identification of activating regions 2 and 3 in CooA, the co-sensing transcriptional activator

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901203-2

7 January 2021

Transcription activation at class II CAP-dependent promoters: two interactions between CAP and RNA polymerase

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901203-2

7 January 2021

Genetic strategy for analyzing specificity of dimer formation: Escherichia coli cyclic AMP receptor protein mutant altered in its dimerization specificity.

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901203-2

7 January 2021

Protein design: a hierarchic approach.

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901203-2

7 January 2021

Coiled coils: a highly versatile protein folding motif

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901203-2

7 January 2021

Sequence requirements for coiled-coils: analysis with lambda repressor-GCN4 leucine zipper fusions

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901203-2

7 January 2021

Fos leucine zipper variants with increased association capacity

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901203-2

7 January 2021

Effects of side-chain characteristics on stability and oligomerization state of a de novo-designed model coiled-coil: 20 amino acid substitutions in position "d".

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901203-2

7 January 2021

Allosteric regulation of the cAMP receptor protein

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901203-2

7 January 2021

RNA polymerase-cNMP-ligated cAMP receptor protein (CRP) mutant interactions in the enhancement of transcription by CRP mutants

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901203-2

7 January 2021

Effect of mutations at the monomer-monomer interface of cAMP receptor protein on specific DNA binding

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901203-2

7 January 2021

Determination of the conformations of cAMP receptor protein and its T127L,S128A mutant with and without cAMP from small angle neutron scattering measurements

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901203-2

7 January 2021

The structure of the T127L/S128A mutant of cAMP receptor protein facilitates promoter site binding

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901203-2

7 January 2021

Modulation of the stability of a gene-regulatory protein dimer by DNA and cAMP.

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901203-2

7 January 2021

Cyclic AMP-induced conformational change of cyclic AMP receptor protein (CRP): intragenic suppressors of cyclic AMP-independent CRP mutations

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901203-2

7 January 2021

DNA binding and dimerization of the Fe-S-containing FNR protein from Escherichia coli are regulated by oxygen.

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901203-2

7 January 2021

Fnr mutants that activate gene expression in the presence of oxygen

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901203-2

7 January 2021

Characterization of the dimerization domain in the FNR transcription factor.

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901203-2

7 January 2021

The heme pocket afforded by Gly117 is crucial for proper heme ligation and activity of CooA.

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901203-2

7 January 2021

Redox-mediated transcriptional activation in a CooA variant

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901203-2

7 January 2021

Analysis of the L116K variant of CooA, the heme-containing CO sensor, suggests the presence of an unusual heme ligand resulting in novel activity

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901203-2

7 January 2021

An in vivo library-versus-library selection of optimized protein-protein interactions

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901203-2

7 January 2021

An autonomous folding unit mediates the assembly of two-stranded coiled coils

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901203-2

7 January 2021

Determination of the amino acid requirements for a protein hinge in triosephosphate isomerase

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901203-2

7 January 2021

The Escherichia coli aspartate receptor: sequence specificity of a transmembrane helix studied by hydrophobic-biased random mutagenesis

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901203-2

7 January 2021

A direct comparison of helix propensity in proteins and peptides

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901203-2

7 January 2021

Salt bridges destabilize a leucine zipper designed for maximized ion pairing between helices

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901203-2

7 January 2021

Glucose lowers CRP* levels resulting in repression of the lac operon in cells lacking cAMP.

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901203-2

7 January 2021

A set of compatible tac promoter expression vectors

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901203-2

7 January 2021

Leucine is the most stabilizing aliphatic amino acid in the d position of a dimeric leucine zipper coiled coil

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901203-2

7 January 2021

Tolerance of a protein helix to multiple alanine and valine substitutions

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901203-2

7 January 2021

Engineering conformational flexibility in the lactose permease of Escherichia coli: use of glycine-scanning mutagenesis to rescue mutant Glu325-->Asp

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901203-2

7 January 2021

Characterization of activating region 3 from Escherichia coli FNR

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901203-2

7 January 2021

Heme ligation and conformational plasticity in the isolated c domain of cytochrome cd1 nitrite reductase

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901203-2

7 January 2021

Disulfide bond contribution to protein stability: positional effects of substitution in the hydrophobic core of the two-stranded alpha-helical coiled-coil

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901203-2

7 January 2021

Heme redox potential control in de novo designed four-alpha-helix bundle proteins

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901203-2

7 January 2021

Mutagenesis of the cyclic AMP receptor protein of Escherichia coli: targeting positions 83, 127 and 128 of the cyclic nucleotide binding pocket

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901203-2

7 January 2021

Bridge over troubled waters: sensing stress by disulfide bond formation

1 reference

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7 January 2021

Redox-operated genetic switches: the SoxR and OxyR transcription factors

1 reference

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7 January 2021

A novel regulatory switch mediated by the FNR-like protein of Lactobacillus casei

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7 January 2021

YeiL, the third member of the CRP-FNR family in Escherichia coli

1 reference

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7 January 2021

Overproduction and dissection of proteins by the expression-cassette polymerase chain reaction

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https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901203-2

7 January 2021

Identification and expression of genes narL and narX of the nar (nitrate reductase) locus in Escherichia coli K-12.

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901203-2

7 January 2021

Altering the specificity of CooA, the carbon monoxide-sensing transcriptional activator: characterization of CooA variants that bind cyanide in the Fe(II) form with high affinity

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901203-2

7 January 2021

Structure/function analysis of the Ala116-->Lys121 region of endonuclease V by random targeted mutagenesis

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7 January 2021

Spectral characterization of human hemoglobin and its derivatives

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7 January 2021

Identifiers

10.1016/S0022-2836(02)01203-2

1 reference

Europe PubMed Central

PubMed publication ID

1 December 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

1 December 2017

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