(Q44524056)

3 December 2017

The root of the mammalian tree inferred from whole mitochondrial genomes (English)

1 reference

3 December 2017

Matthew J Phillips

1

1 reference

PubMed ID

12878457

3 December 2017

David Penny

series ordinal

2

1 reference

3 December 2017

1 August 2003

1 reference

3 December 2017

15

1 reference

Molecular Phylogenetics and Evolution

inferred from page(s)

published in

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3 December 2017

28

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3 December 2017

171-185

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3 December 2017

2

1 reference

Plastid genome phylogeny and a model of amino acid substitution for proteins encoded by chloroplast DNA.

3 December 2017

1 reference

https://api.crossref.org/works/10.1016%2FS1055-7903%2803%2900057-5

7 January 2021

Characterization of immunoglobulin gamma 1 from a monotreme, Tachyglossus aculeatus

1 reference

https://api.crossref.org/works/10.1016%2FS1055-7903%2803%2900057-5

7 January 2021

Interordinal relationships and timescale of eutherian evolution as inferred from mitochondrial genome data

1 reference

https://api.crossref.org/works/10.1016%2FS1055-7903%2803%2900057-5

7 January 2021

Phylogenetic position of turtles among amniotes: evidence from mitochondrial and nuclear genes

1 reference

https://api.crossref.org/works/10.1016%2FS1055-7903%2803%2900057-5

7 January 2021

Aspects of the structure and development of monotreme spermatozoa and their relevance to the evolution of mammalian sperm morphology

1 reference

https://api.crossref.org/works/10.1016%2FS1055-7903%2803%2900057-5

7 January 2021

A partitioned likelihood analysis of swallowtail butterfly phylogeny (Lepidoptera:Papilionidae).

1 reference

https://api.crossref.org/works/10.1016%2FS1055-7903%2803%2900057-5

7 January 2021

Maximum likelihood analysis of gene-based and structure-based process partitions, using mammalian mitochondrial genomes

1 reference

https://api.crossref.org/works/10.1016%2FS1055-7903%2803%2900057-5

7 January 2021

Evolutionary trees from DNA sequences: A maximum likelihood approach

1 reference

https://api.crossref.org/works/10.1016%2FS1055-7903%2803%2900057-5

7 January 2021

Nucleotide composition bias affects amino acid content in proteins coded by animal mitochondria.

1 reference

https://api.crossref.org/works/10.1016%2FS1055-7903%2803%2900057-5

7 January 2021

Compositional bias may affect both DNA-based and protein-based phylogenetic reconstructions.

1 reference

https://api.crossref.org/works/10.1016%2FS1055-7903%2803%2900057-5

7 January 2021

Inferring pattern and process: maximum-likelihood implementation of a nonhomogeneous model of DNA sequence evolution for phylogenetic analysis.

1 reference

https://api.crossref.org/works/10.1016%2FS1055-7903%2803%2900057-5

7 January 2021

Phylogenetic relationships within the class mammalia: A study using mitochondrial 12S RNA sequences

1 reference

https://api.crossref.org/works/10.1016%2FS1055-7903%2803%2900057-5

7 January 2021

Evolutionary inventions and continuity of CORE-SINEs in mammals

1 reference

https://api.crossref.org/works/10.1016%2FS1055-7903%2803%2900057-5

7 January 2021

A compilation of large subunit (23S and 23S-like) ribosomal RNA structures: 1993

1 reference

https://api.crossref.org/works/10.1016%2FS1055-7903%2803%2900057-5

7 January 2021

Complete mitochondrial DNA genome sequences of extinct birds: ratite phylogenetics and the vicariance biogeography hypothesis

1 reference

https://api.crossref.org/works/10.1016%2FS1055-7903%2803%2900057-5

7 January 2021

Analyses of mitochondrial DNA nest ratite birds within the Neognathae: supporting a neotenous origin of ratite morphological characters

1 reference

https://api.crossref.org/works/10.1016%2FS1055-7903%2803%2900057-5

7 January 2021

A new symmetrodont mammal from China and its implications for mammalian evolution

1 reference

https://api.crossref.org/works/10.1016%2FS1055-7903%2803%2900057-5

7 January 2021

The mitochondrial genome of a monotreme--the platypus (Ornithorhynchus anatinus).

1 reference

https://api.crossref.org/works/10.1016%2FS1055-7903%2803%2900057-5

7 January 2021

The complete mitochondrial genome of the wallaroo (Macropus robustus) and the phylogenetic relationship among Monotremata, Marsupialia, and Eutheria

1 reference

https://api.crossref.org/works/10.1016%2FS1055-7903%2803%2900057-5

7 January 2021

The mitochondrial genomes of the iguana (Iguana iguana) and the caiman (Caiman crocodylus): implications for amniote phylogeny

1 reference

https://api.crossref.org/works/10.1016%2FS1055-7903%2803%2900057-5

7 January 2021

Phylogenetic Analysis of 18S rRNA and the Mitochondrial Genomes of the Wombat, Vombatus ursinus, and the Spiny Anteater, Tachyglossus aculeatus: Increased Support for the Marsupionta Hypothesis

1 reference

https://api.crossref.org/works/10.1016%2FS1055-7903%2803%2900057-5

7 January 2021

Biostratigraphy of new pterosaurs from China

1 reference

https://api.crossref.org/works/10.1016%2FS1055-7903%2803%2900057-5

7 January 2021

M6P/IGF2R imprinting evolution in mammals

1 reference

https://api.crossref.org/works/10.1016%2FS1055-7903%2803%2900057-5

7 January 2021

Marsupials and Eutherians reunited: genetic evidence for the Theria hypothesis of mammalian evolution.

1 reference

https://api.crossref.org/works/10.1016%2FS1055-7903%2803%2900057-5

7 January 2021

The platypus is not a rodent: DNA hybridization, amniote phylogeny and the palimpsest theory

1 reference

https://api.crossref.org/works/10.1016%2FS1055-7903%2803%2900057-5

7 January 2021

Evaluation of the maximum likelihood estimate of the evolutionary tree topologies from DNA sequence data, and the branching order in hominoidea

1 reference

https://api.crossref.org/works/10.1016%2FS1055-7903%2803%2900057-5

7 January 2021

Dynamically heterogenous partitions and phylogenetic inference: an evaluation of analytical strategies with cytochrome b and ND6 gene sequences in cranes.

1 reference

https://api.crossref.org/works/10.1016%2FS1055-7903%2803%2900057-5

7 January 2021

Molecular phylogeny and evolution of the neurotrophins from monotremes and marsupials.

1 reference

https://api.crossref.org/works/10.1016%2FS1055-7903%2803%2900057-5

7 January 2021

The systematic position of monotremes reconsidered (Mammalia)

1 reference

https://api.crossref.org/works/10.1016%2FS1055-7903%2803%2900057-5

7 January 2021

Evolution and molecular characterization of a beta-globin gene from the Australian Echidna Tachyglossus aculeatus (Monotremata).

1 reference

https://api.crossref.org/works/10.1016%2FS1055-7903%2803%2900057-5

7 January 2021

Four new mitochondrial genomes and the increased stability of evolutionary trees of mammals from improved taxon sampling

1 reference

https://api.crossref.org/works/10.1016%2FS1055-7903%2803%2900057-5

7 January 2021

Evolution of chlorophyll and bacteriochlorophyll: the problem of invariant sites in sequence analysis

1 reference

https://api.crossref.org/works/10.1016%2FS1055-7903%2803%2900057-5

7 January 2021

Dual origin of tribosphenic mammals

1 reference

https://api.crossref.org/works/10.1016%2FS1055-7903%2803%2900057-5

7 January 2021

Parallel adaptive radiations in two major clades of placental mammals

1 reference

https://api.crossref.org/works/10.1016%2FS1055-7903%2803%2900057-5

7 January 2021

Evolution of the Monotremes: Phylogenetic Relationship to Marsupials and Eutherians, and Estimation of Divergence Dates Based on α-Lactalbumin Amino Acid Sequences

1 reference

https://api.crossref.org/works/10.1016%2FS1055-7903%2803%2900057-5

7 January 2021

Interordinal relationships of birds and other reptiles based on whole mitochondrial genomes

1 reference

https://api.crossref.org/works/10.1016%2FS1055-7903%2803%2900057-5

7 January 2021

The evolution of base composition and phylogenetic inference

1 reference

https://api.crossref.org/works/10.1016%2FS1055-7903%2803%2900057-5

7 January 2021

The phylogenetic position of the Talpidae within eutheria based on analysis of complete mitochondrial sequences

1 reference

https://api.crossref.org/works/10.1016%2FS1055-7903%2803%2900057-5

7 January 2021

Molecular phylogenetics and the origins of placental mammals

1 reference

https://api.crossref.org/works/10.1016%2FS1055-7903%2803%2900057-5

7 January 2021

Resolution of the early placental mammal radiation using Bayesian phylogenetics

1 reference

https://api.crossref.org/works/10.1016%2FS1055-7903%2803%2900057-5

7 January 2021

Amphioxus mitochondrial DNA, chordate phylogeny, and the limits of inference based on comparisons of sequences

1 reference

https://api.crossref.org/works/10.1016%2FS1055-7903%2803%2900057-5

7 January 2021

Estimating changes in mutational mechanisms of evolution.

1 reference

https://api.crossref.org/works/10.1016%2FS1055-7903%2803%2900057-5

7 January 2021

The platypus put in its place

1 reference

https://api.crossref.org/works/10.1016%2FS1055-7903%2803%2900057-5

7 January 2021

Mammalian evolution: timing and implications from using the LogDeterminant transform for proteins of differing amino acid composition

1 reference

https://api.crossref.org/works/10.1016%2FS1055-7903%2803%2900057-5

7 January 2021

Mitochondrial genomes of a bandicoot and a brushtail possum confirm the monophyly of australidelphian marsupials

1 reference

https://api.crossref.org/works/10.1016%2FS1055-7903%2803%2900057-5

7 January 2021

Evolution of the monotremes. The sequences of the protamine P1 genes of platypus and echidna.

1 reference

https://api.crossref.org/works/10.1016%2FS1055-7903%2803%2900057-5

7 January 2021

Asymmetrical directional mutation pressure in the mitochondrial genome of mammals.

1 reference

https://api.crossref.org/works/10.1016%2FS1055-7903%2803%2900057-5

7 January 2021

Complete mitochondrial DNA sequence of the fat dormouse, Glis glis: further evidence of rodent paraphyly

1 reference

https://api.crossref.org/works/10.1016%2FS1055-7903%2803%2900057-5

7 January 2021

Definition, diagnosis, and origin of Mammalia

1 reference

https://api.crossref.org/works/10.1016%2FS1055-7903%2803%2900057-5

7 January 2021

The complete mitochondrial sequence of Tarsius bancanus: evidence for an extensive nucleotide compositional plasticity of primate mitochondrial DNA.

1 reference

https://api.crossref.org/works/10.1016%2FS1055-7903%2803%2900057-5

7 January 2021

Development of early cell lineages in marsupial embryos: an overview

1 reference

https://api.crossref.org/works/10.1016%2FS1055-7903%2803%2900057-5

7 January 2021

Cretaceous multituberculate skeleton and the early evolution of the mammalian shoulder girdle

1 reference

https://api.crossref.org/works/10.1016%2FS1055-7903%2803%2900057-5

7 January 2021

Amino acid vs. nucleotide characters: challenging preconceived notions

1 reference

https://api.crossref.org/works/10.1016%2FS1055-7903%2803%2900057-5

7 January 2021

Nucleotide bias causes a genomewide bias in the amino acid composition of proteins.

1 reference

https://api.crossref.org/works/10.1016%2FS1055-7903%2803%2900057-5

7 January 2021

Molecular evidence from retroposons that whales form a clade within even-toed ungulates.

1 reference

https://api.crossref.org/works/10.1016%2FS1055-7903%2803%2900057-5

7 January 2021

Secondary structure and patterns of evolution among mammalian mitochondrial 12S rRNA molecules

1 reference

https://api.crossref.org/works/10.1016%2FS1055-7903%2803%2900057-5

7 January 2021

Mitochondrial versus nuclear gene sequences in deep-level mammalian phylogeny reconstruction

1 reference

https://api.crossref.org/works/10.1016%2FS1055-7903%2803%2900057-5

7 January 2021

Parsimony, likelihood, and the role of models in molecular phylogenetics.

1 reference

https://api.crossref.org/works/10.1016%2FS1055-7903%2803%2900057-5

7 January 2021

On the genetic basis of variation and heterogeneity of DNA base composition

1 reference

https://api.crossref.org/works/10.1016%2FS1055-7903%2803%2900057-5

7 January 2021

Intrastrand parity rules of DNA base composition and usage biases of synonymous codons.

1 reference

https://api.crossref.org/works/10.1016%2FS1055-7903%2803%2900057-5

7 January 2021

Should we use model-based methods for phylogenetic inference when we know that assumptions about among-site rate variation and nucleotide substitution pattern are violated?

1 reference

https://api.crossref.org/works/10.1016%2FS1055-7903%2803%2900057-5

7 January 2021

Strand asymmetry in human mitochondrial DNA mutations

1 reference

https://api.crossref.org/works/10.1016%2FS1055-7903%2803%2900057-5

7 January 2021

Shared nucleotide composition biases among species and their impact on phylogenetic reconstructions of the Drosophilidae

1 reference

https://api.crossref.org/works/10.1016%2FS1055-7903%2803%2900057-5

7 January 2021

Identification and characterization of amelogenin genes in monotremes, reptiles, and amphibians

1 reference

https://api.crossref.org/works/10.1016%2FS1055-7903%2803%2900057-5

7 January 2021

Morphology of the kidney of the platypus (Ornithorhynchus anatinus: Monotremata)

1 reference

https://api.crossref.org/works/10.1016%2FS1055-7903%2803%2900057-5

7 January 2021

Using novel phylogenetic methods to evaluate mammalian mtDNA, including amino acid-invariant sites-LogDet plus site stripping, to detect internal conflicts in the data, with special reference to the positions of hedgehog, armadillo, and elephant

1 reference

https://api.crossref.org/works/10.1016%2FS1055-7903%2803%2900057-5

7 January 2021

Maximum-Likelihood Models for Combined Analyses of Multiple Sequence Data

1 reference

https://api.crossref.org/works/10.1016%2FS1055-7903%2803%2900057-5

7 January 2021

Complete mitochondrial genome suggests diapsid affinities of turtles

1 reference

https://api.crossref.org/works/10.1016%2FS1055-7903%2803%2900057-5

7 January 2021

On the origin of and phylogenetic relationships among living amphibians

1 reference

https://api.crossref.org/works/10.1016%2FS1055-7903%2803%2900057-5

7 January 2021

10.1016/S1055-7903(03)00057-5

Identifiers

DOI

1 reference

3 December 2017

1 reference

PubMed ID

12878457