(Q44541122)

4 December 2017

Reconstructing potentials of mean force from short steered molecular dynamics simulations of Vpu from HIV-1. (English)

1 reference

4 December 2017

George Patargias

1

1 reference

PubMed ID

19492858

4 December 2017

Hugo Martay

series ordinal

2

1 reference

PubMed ID

19492858

4 December 2017

Wolfgang B Fischer

series ordinal

3

1 reference

4 December 2017

1 August 2009

1 reference

Journal of Biomolecular Structure and Dynamics

4 December 2017

1 reference

4 December 2017

27

1 reference

4 December 2017

1

1 reference

4 December 2017

1-12

1 reference

Energetics of ion conduction through the gramicidin channel

4 December 2017

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2009.10507291

Brownian dynamics study of an open-state KcsA potassium channel.

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2009.10507291

Water dynamics and dewetting transitions in the small mechanosensitive channel MscS.

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2009.10507291

Role of protein flexibility in ion permeation: a case study in gramicidin A.

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2009.10507291

Three-dimensional Poisson-Nernst-Planck theory studies: influence of membrane electrostatics on gramicidin A channel conductance

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2009.10507291

Study of ionic currents across a model membrane channel using Brownian dynamics

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2009.10507291

Identification of a protein encoded by the vpu gene of HIV-1.

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2009.10507291

The structure of the HIV-1 Vpu ion channel: modelling and simulation studies.

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2009.10507291

Water permeation across biological membranes: mechanism and dynamics of aquaporin-1 and GlpF.

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2009.10507291

Structure of the protein subunits in the photosynthetic reaction centre of Rhodopseudomonas viridis at 3Å resolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2009.10507291

Vpu from HIV-1 on an atomic scale: experiments and computer simulations.

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2009.10507291

Ion channels formed by HIV-1 Vpu: a modelling and simulation study

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2009.10507291

Ligand binding: molecular mechanics calculation of the streptavidin-biotin rupture force

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2009.10507291

Steered molecular dynamics studies of the potential of mean force of a Na+ or K+ ion in a cyclic peptide nanotube

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2009.10507291

A Grand Canonical Monte Carlo-Brownian dynamics algorithm for simulating ion channels

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2009.10507291

Equilibrium free-energy differences from nonequilibrium measurements: A master-equation approach

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2009.10507291

Interaction of amiloride and one of its derivatives with Vpu from HIV-1: a molecular dynamics simulation

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2009.10507291

Evidence that the M2 membrane-spanning region lines the ion channel pore of the nicotinic receptor

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2009.10507291

Steered molecular dynamics simulations of Na+ permeation across the gramicidin A channel.

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2009.10507291

Unfolding of titin immunoglobulin domains by steered molecular dynamics simulation

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2009.10507291

Hierarchical approach to predicting permeation in ion channels

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2009.10507291

Towards a mechanism of function of the viral ion channel Vpu from HIV-1.

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2009.10507291

Tests of continuum theories as models of ion channels. I. Poisson-Boltzmann theory versus Brownian dynamics.

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2009.10507291

Protein-water-ion interactions in a model of the pore domain of a potassium channel: a simulation study.

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2009.10507291

The noncompetitive blocker [3H]chlorpromazine labels three amino acids of the acetylcholine receptor gamma subunit: implications for the alpha-helical organization of regions MII and for the structure of the ion channel

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2009.10507291

Ion channels, permeation, and electrostatics: insight into the function of KcsA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2009.10507291

The cavity and pore helices in the KcsA K+ channel: electrostatic stabilization of monovalent cations.

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2009.10507291

Brownian dynamics simulation of ion flow through porin channels.

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2009.10507291

Steered molecular dynamics simulation on the binding of NNRTI to HIV-1 RT.

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2009.10507291

Simulations of ion permeation through a potassium channel: molecular dynamics of KcsA in a phospholipid bilayer

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2009.10507291

Electrostatic properties of the mechanosensitive channel of small conductance MscS.

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2009.10507291

A novel gene of HIV-1, vpu, and its 16-kilodalton product

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2009.10507291

The gating mechanism of the large mechanosensitive channel MscL

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2009.10507291

Climatic impact of tropical lowland deforestation on nearby montane cloud forests

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2009.10507291

Reconstructing Potentials of Mean Force through Time Series Analysis of Steered Molecular Dynamics Simulations

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2009.10507291

Bundles Consisting of Extended Transmembrane Segments of Vpu from HIV-1: Computer Simulations and Conductance Measurements†

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2009.10507291

Energy of an Ion crossing a Low Dielectric Membrane: Solutions to Four Relevant Electrostatic Problems

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2009.10507291

10.1080/07391102.2009.10507291

21 January 2018

Identifiers

DOI

1 reference

4 December 2017

1 reference

PubMed ID

19492858